RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SHROOM3Q8TF72 1996 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 DOCK6Q96HP0 2047 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 NOTCH4Q99466 2003 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 COL6A6A6NMZ7 2263 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 FLNCQ14315 2725 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 ANTXRLA6NF34 631 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 RFPL3O75679 317 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 ABLIM3O94929 683 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 SEC24AO95486 1093 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 AFPP02771 609 aaKnown RBP4.14□□□□□ -1.75
HERC1-211ENST00000560983 PCP11498 1178 aaKnown RBP4.14□□□□□ -1.75
HERC1-211ENST00000560983 MYF5P13349 255 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 HNRNPLP14866 589 aaKnown RBP eCLIP4.14□□□□□ -1.755e-11■■■■□ 21.9
HERC1-211ENST00000560983 TMOD1P28289 359 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 ADRA1BP35368 520 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 HOXD12P35452 270 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 P2RY2P41231 377 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 KIR2DL3P43628 341 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 HAND2P61296 217 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 MYO1EQ12965 1108 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 TRAF1Q13077 416 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 TEAD2Q15562 447 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 ARHGAP29Q52LW3 1261 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 DCAF17Q5H9S7 520 aaPredicted RBP4.14□□□□□ -1.75
HERC1-211ENST00000560983 FAM160B1Q5W0V3 765 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 MFSD6Q6ZSS7 791 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 PDZD4Q76G19 769 aaPredicted RBP4.14□□□□□ -1.75
HERC1-211ENST00000560983 CEP57Q86XR8 500 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 ARID3BQ8IVW6 561 aaPredicted RBP4.14□□□□□ -1.75
HERC1-211ENST00000560983 YAF2Q8IY57 180 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 CMTM4Q8IZR5 234 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 RPLP0P6Q8NHW5 317 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 SNRNP27Q8WVK2 155 aaKnown RBP4.14□□□□□ -1.75
HERC1-211ENST00000560983 FGF11Q92914 225 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 CNOT6LQ96LI5 555 aaKnown RBP4.14□□□□□ -1.75
HERC1-211ENST00000560983 ZNF512Q96ME7 567 aaPredicted RBP4.14□□□□□ -1.75
HERC1-211ENST00000560983 MNTQ99583 582 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 SDF4Q9BRK5 362 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 IFT122Q9HBG6 1241 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 CPNE5Q9HCH3 593 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 UBN1Q9NPG3 1134 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 AGPAT5Q9NUQ2 364 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 DNAI1Q9UI46 699 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 SPO11Q9Y5K1 396 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 TNPO3Q9Y5L0 923 aaKnown RBP4.14□□□□□ -1.75
HERC1-211ENST00000560983 HS3ST4Q9Y661 456 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 C2CD3Q4AC94 2353 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 NEDD4P46934 1319 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 ATG2BQ96BY7 2078 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 AKAP9Q99996 3911 aa4.14□□□□□ -1.75
HERC1-211ENST00000560983 PCSK5Q92824 1860 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 IGKV6-21A0A0C4DH24 114 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 TMEM191CA6NGB0 347 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 GOLGA6L6A8MZA4 724 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 DDX39AO00148 427 aaKnown RBP4.13□□□□□ -1.75
HERC1-211ENST00000560983 DRD1P21728 446 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 FBLP22087 321 aaKnown RBP4.13□□□□□ -1.75
HERC1-211ENST00000560983 SFPQP23246 707 aaKnown RBP eCLIP4.13□□□□□ -1.75
HERC1-211ENST00000560983 U2AF2P26368 475 aaKnown RBP eCLIP4.13□□□□□ -1.75
HERC1-211ENST00000560983 PTGS2P35354 604 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 MLH1P40692 756 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 DPP6P42658 865 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 CDC42EP1Q00587 391 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 ITPRIPL2Q3MIP1 535 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 PREPLQ4J6C6 727 aaPredicted RBP4.13□□□□□ -1.75
HERC1-211ENST00000560983 STXBP5Q5T5C0 1151 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 CYP4A22Q5TCH4 519 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 ARHGAP40Q5TG30 622 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 PRAMEF9Q5VWM5 478 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 LYSMD4Q5XG99 296 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 ANO7Q6IWH7 933 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 MIS18BP1Q6P0N0 1132 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 CD300LGQ6UXG3 332 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 CATSPER4Q7RTX7 472 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 APBB1IPQ7Z5R6 666 aaPredicted RBP4.13□□□□□ -1.75
HERC1-211ENST00000560983 PHYKPLQ8IUZ5 450 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 TCEAL8Q8IYN2 117 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 FAM9BQ8IZU0 186 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 DEFB119Q8N690 84 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 EXD3Q8N9H8 876 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 TSTD1Q8NFU3 115 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 ZNF461Q8TAF7 563 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 HASPINQ8TF76 798 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 SLC25A43Q8WUT9 341 aaPredicted RBP4.13□□□□□ -1.75
HERC1-211ENST00000560983 ESR2Q92731 530 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 HAS1Q92839 578 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 SCLT1Q96NL6 688 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 TUBGCP5Q96RT8 1024 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 ELF4Q99607 663 aaPredicted RBP4.13□□□□□ -1.75
HERC1-211ENST00000560983 EIF2AQ9BY44 585 aaKnown RBP4.13□□□□□ -1.75
HERC1-211ENST00000560983 GPR88Q9GZN0 384 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 OSBPL2Q9H1P3 480 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 PCIF1Q9H4Z3 704 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 ZMAT4Q9H898 229 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 MINDY3Q9H8M7 445 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 PRDM16Q9HAZ2 1276 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 IL21RQ9HBE5 538 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 HPS4Q9NQG7 708 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 MTRRQ9UBK8 725 aa4.13□□□□□ -1.75
HERC1-211ENST00000560983 PCDHA6Q9UN73 950 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms