RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 CBWD5Q5RIA9 395 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 NEK5Q6P3R8 708 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 FAM181AQ8N9Y4 354 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 TMEM145Q8NBT3 493 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 DQX1Q8TE96 717 aaKnown RBP19.12■□□□□ 0.65
TPM1-226ENST00000560959 KCNE4Q8WWG9 221 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 OR8D1Q8WZ84 308 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 IFT43Q96FT9 208 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 NAF1Q96HR8 494 aaKnown RBP19.12■□□□□ 0.65
TPM1-226ENST00000560959 PPP1R9BQ96SB3 815 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 CPNE5Q9HCH3 593 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 THSD1Q9NS62 852 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 PPM1HQ9ULR3 514 aa19.12■□□□□ 0.65
TPM1-226ENST00000560959 A0A1B0GVL5 298 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 RIOK3O14730 519 aaKnown RBP19.11■□□□□ 0.65
TPM1-226ENST00000560959 SART1O43290 800 aaKnown RBP19.11■□□□□ 0.65
TPM1-226ENST00000560959 USP12O75317 370 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 MPOP05164 745 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 GIMD1P0DJR0 217 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 ALPPL2P10696 532 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 RGS7P49802 495 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 DUSP3P51452 185 aaPredicted RBP19.11■□□□□ 0.65
TPM1-226ENST00000560959 KCNC4Q03721 635 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 KCNMA1Q12791 1236 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 FOXD4L6Q3SYB3 417 aaPredicted RBP19.11■□□□□ 0.65
TPM1-226ENST00000560959 AGBL4Q5VU57 503 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 FOXD4L3Q6VB84 417 aaPredicted RBP19.11■□□□□ 0.65
TPM1-226ENST00000560959 LGI2Q8N0V4 545 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 FAM174AQ8TBP5 190 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 TFAP2BQ92481 460 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 TRIM62Q9BVG3 475 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 ASCL3Q9NQ33 180 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 EVA1BQ9NVM1 165 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 NLGN3Q9NZ94 848 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 TJP2Q9UDY2 1190 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 SARDHQ9UL12 918 aa19.11■□□□□ 0.65
TPM1-226ENST00000560959 NEMP2A6NFY4 417 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 C1QTNF3-AMACRE9PGA6 284 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 MCF2LO15068 1137 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 ATP9BO43861 1147 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 THEGLP0DJG4 465 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 RPL34P49207 117 aaKnown RBP19.1■□□□□ 0.65
TPM1-226ENST00000560959 STK19P49842 368 aaPredicted RBP19.1■□□□□ 0.65
TPM1-226ENST00000560959 METAP1P53582 386 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 NUCB2P80303 420 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 CCDC15Q0P6D6 951 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 FOXD4L5Q5VV16 416 aaPredicted RBP19.1■□□□□ 0.65
TPM1-226ENST00000560959 CLEC4CQ8WTT0 213 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 FOXD4L4Q8WXT5 416 aaPredicted RBP19.1■□□□□ 0.65
TPM1-226ENST00000560959 ERCC4Q92889 916 aaPredicted RBP19.1■□□□□ 0.65
TPM1-226ENST00000560959 CCDC97Q96F63 343 aaPredicted RBP19.1■□□□□ 0.65
TPM1-226ENST00000560959 MED8Q96G25 268 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 BTN2A3PQ96KV6 586 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 DUSP23Q9BVJ7 150 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 SEMA4CQ9C0C4 833 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 MYO18BQ8IUG5 2567 aa19.1■□□□□ 0.65
TPM1-226ENST00000560959 FAM237AA0A1B0GTK4 181 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 A0A1B0GVM2 712 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 KLK10O43240 276 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 PIAS2O75928 621 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 APOEP02649 317 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 VAV1P15498 845 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 TACR2P21452 398 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 SKOR1P84550 965 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 CNTN1Q12860 1018 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 TTC39BQ5VTQ0 682 aaPredicted RBP19.09■□□□□ 0.65
TPM1-226ENST00000560959 TMEM270Q6UE05 265 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 ABCG4Q9H172 646 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 UCKL1Q9NWZ5 548 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 NAALADL1Q9UQQ1 740 aa19.09■□□□□ 0.65
TPM1-226ENST00000560959 CYSRT1A8MQ03 144 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 K7ENP7 123 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 M0QYV0 167 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 PIK3R2O00459 728 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 SLC16A3O15427 465 aaKnown RBP19.08■□□□□ 0.64
TPM1-226ENST00000560959 CSO75390 466 aaKnown RBP19.08■□□□□ 0.64
TPM1-226ENST00000560959 MOCS2O96007 188 aaPredicted RBP19.08■□□□□ 0.64
TPM1-226ENST00000560959 PRR29P0C7W0 189 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 SYKP43405 635 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 DNM1Q05193 864 aaKnown RBP19.08■□□□□ 0.64
TPM1-226ENST00000560959 TCERG1LQ5VWI1 586 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 RAP1GAP2Q684P5 730 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 INO80CQ6PI98 192 aaPredicted RBP19.08■□□□□ 0.64
TPM1-226ENST00000560959 TMC6Q7Z403 805 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 CHSY1Q86X52 802 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 DCP2Q8IU60 420 aaKnown RBP19.08■□□□□ 0.64
TPM1-226ENST00000560959 APOLD1Q96LR9 279 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 ZSWIM1Q9BR11 485 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 MIS12Q9H081 205 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 SLC12A6Q9UHW9 1150 aa19.08■□□□□ 0.64
TPM1-226ENST00000560959 XPO7Q9UIA9 1087 aaKnown RBP19.08■□□□□ 0.64
TPM1-226ENST00000560959 F5H5T6 163 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 SCAMP1O15126 338 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 PMM2O15305 246 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 WISP1O95388 367 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 PDGFRAP16234 1089 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 ACADSBP45954 432 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 TAS2R38P59533 333 aa19.07■□□□□ 0.64
TPM1-226ENST00000560959 EIF4EBP2Q13542 120 aaPredicted RBP19.07■□□□□ 0.64
TPM1-226ENST00000560959 LY6DQ14210 128 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms