RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 EFHC2Q5JST6 749 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 PMS2CLQ68D20 193 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 CNGA4Q8IV77 575 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 OR7D4Q8NG98 312 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 PTPRN2Q92932 1015 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 TBC1D31Q96DN5 1066 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 LOXL4Q96JB6 756 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 PPP1R9BQ96SB3 815 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 NHEJ1Q9H9Q4 299 aaPredicted RBP15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 ITM2CQ9NQX7 267 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 TMEM248Q9NWD8 314 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 ZNHIT6Q9NWK9 470 aaKnown RBP15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 GPATCH2LQ9NWQ4 482 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 VPS51Q9UID3 782 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 VPS28Q9UK41 221 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 RAB23Q9ULC3 237 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 CHD5Q8TDI0 1954 aa15.67■□□□□ 0.1
SNRPA1-213ENST00000560856 ZBTB24O43167 697 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 ATP9BO43861 1147 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 SIN3BO75182 1162 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 MT-CO1P00395 513 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 IGLV3-19P01714 112 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 TCF4P15884 667 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 IL1R2P27930 398 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 ST8SIA6P61647 398 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 RPS14P62263 151 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 BYSLQ13895 437 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 NUMA1Q14980 2115 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 ACAP1Q15027 740 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 C6orf118Q5T5N4 469 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 DAB2IPQ5VWQ8 1189 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 KIAA1324Q6UXG2 1013 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 ZNF783Q6ZMS7 281 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 C11orf74Q86VG3 221 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 DCAF4L2Q8NA75 395 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 SIPA1Q96FS4 1042 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 BTBD6Q96KE9 485 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 FAM129BQ96TA1 746 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 SNRNP25Q9BV90 132 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 NUP85Q9BW27 656 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 ACE2Q9BYF1 805 aaPredicted RBP15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 MUC3BQ9H195 1237 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 NOL6Q9H6R4 1146 aaKnown RBP15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 FBRSQ9HAH7 460 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 PARD6AQ9NPB6 346 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 NCDNQ9UBB6 729 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 PCSK1NQ9UHG2 260 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 CYP8B1Q9UNU6 501 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 HS3ST2Q9Y278 367 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 THADAQ6YHU6 1953 aa15.66■□□□□ 0.1
SNRPA1-213ENST00000560856 TARSL2A2RTX5 802 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 WASH4PA8MWX3 477 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 ZNF217O75362 1048 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 RNF8O76064 485 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 EPN2O95208 641 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 VAV1P15498 845 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 GLDCP23378 1020 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 PCK1P35558 622 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 MAPKAPK2P49137 400 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 GNA12Q03113 381 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 TSR1Q2NL82 804 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 ERMARDQ5T6L9 678 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 RWDD4Q6NW29 188 aaKnown RBP15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 SH2D3CQ8N5H7 860 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 NIPA2Q8N8Q9 360 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 RSPH9Q9H1X1 276 aaPredicted RBP15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 SPTLC3Q9NUV7 552 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 GMEB2Q9UKD1 530 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 USP18Q9UMW8 372 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 AP4E1Q9UPM8 1137 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 CEP250Q9BV73 2442 aa15.65■□□□□ 0.1
SNRPA1-213ENST00000560856 EDDM13A0A1B0GTR0 161 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 K7ERQ8 282 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 AKR1B10O60218 316 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 RHOBTB1O94844 696 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 CD160O95971 181 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 H2AFZP0C0S5 128 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 SRCP12931 536 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 DESP17661 470 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 EPHB2P29323 1055 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 ACVRL1P37023 503 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 TPMTP51580 245 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 PIGHQ14442 188 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 ELF2Q15723 593 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 TXNRD3NBQ6F5E7 133 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 H2AFVQ71UI9 128 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 CPNE8Q86YQ8 564 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 PSTKQ8IV42 348 aaKnown RBP15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 STK40Q8N2I9 435 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 RTL3Q8N8U3 475 aaKnown RBP15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 PRCCQ92733 491 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 ARHGEF2Q92974 986 aaKnown RBP15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 SPACA7Q96KW9 195 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 CCDC42Q96M95 316 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 KCTD15Q96SI1 283 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 NCAPGQ9BPX3 1015 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 C2orf49Q9BVC5 232 aaPredicted RBP15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 DEF6Q9H4E7 631 aa15.64■□□□□ 0.09
SNRPA1-213ENST00000560856 WSB2Q9NYS7 404 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms