RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 SV2BQ7L1I2 683 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 RAB11FIP2Q7L804 512 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 STK40Q8N2I9 435 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 FIBINQ8TAL6 211 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 CYFIP2Q96F07 1278 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 CALN1Q9BXU9 219 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 STRADBQ9C0K7 418 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 DNAJC28Q9NX36 388 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 STK17AQ9UEE5 414 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 SALL4Q9UJQ4 1053 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 ERVW-1Q9UQF0 538 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 PLAAQ9Y263 795 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 CSNK1G3Q9Y6M4 447 aa10.65□□□□□ -0.7
APH1B-208ENST00000560353 ITIH6Q6UXX5 1313 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 IRAK2O43187 625 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 TBL1XO60907 577 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 AGFG2O95081 481 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 KIF20AO95235 890 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 POU3F2P20265 443 aaPredicted RBP10.64□□□□□ -0.71
APH1B-208ENST00000560353 MZF1P28698 734 aaPredicted RBP10.64□□□□□ -0.71
APH1B-208ENST00000560353 POLE2P56282 527 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 YWHAGP61981 247 aaKnown RBP eCLIP10.64□□□□□ -0.71
APH1B-208ENST00000560353 BIRC3Q13489 604 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 NCOA4Q13772 614 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 RNF219Q5W0B1 726 aaPredicted RBP10.64□□□□□ -0.71
APH1B-208ENST00000560353 CRTC1Q6UUV9 634 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 VASH2Q86V25 355 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 DCP2Q8IU60 420 aaKnown RBP10.64□□□□□ -0.71
APH1B-208ENST00000560353 MFN1Q8IWA4 741 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 ZNF548Q8NEK5 533 aaPredicted RBP10.64□□□□□ -0.71
APH1B-208ENST00000560353 OR13H1Q8NG92 308 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 FAM174AQ8TBP5 190 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 WFDC5Q8TCV5 224 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 HTR3CQ8WXA8 447 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 GLMNQ92990 594 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 NAT6Q93015 286 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 LMLNQ96KR4 655 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 DUSP16Q9BY84 665 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 FGFBP2Q9BYJ0 223 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 PREBQ9HCU5 417 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 OLA1Q9NTK5 396 aaKnown RBP10.64□□□□□ -0.71
APH1B-208ENST00000560353 HMGXB4Q9UGU5 601 aa10.64□□□□□ -0.71
APH1B-208ENST00000560353 FRMD3A2A2Y4 597 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 H3BM21 787 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 TPP1O14773 563 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 MUSKO15146 869 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 SLC31A1O15431 190 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 AKT2P31751 481 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 CD97P48960 835 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 SGSHP51688 502 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 PDX1P52945 283 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 AP3M2P53677 418 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 ECT2LQ008S8 904 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 SGSM1Q2NKQ1 1148 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 ZNF542PQ5EBM4 170 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 PIK3R6Q5UE93 754 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 FAM46CQ5VWP2 391 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 NEK5Q6P3R8 708 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 CCDC117Q8IWD4 279 aaPredicted RBP10.63□□□□□ -0.71
APH1B-208ENST00000560353 PTPRN2Q92932 1015 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 MIB2Q96AX9 1013 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 SPAG5Q96R06 1193 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 SRRTQ9BXP5 876 aaKnown RBP10.63□□□□□ -0.71
APH1B-208ENST00000560353 DNAI2Q9GZS0 605 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 EPB41L5Q9HCM4 733 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 PANK4Q9NVE7 773 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 CCDC39Q9UFE4 941 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 SLCO3A1Q9UIG8 710 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 INTS6Q9UL03 887 aaKnown RBP10.63□□□□□ -0.71
APH1B-208ENST00000560353 CEP83Q9Y592 693 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 NF1P21359 2839 aa10.63□□□□□ -0.71
APH1B-208ENST00000560353 MOCS3O95396 460 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 BMP15O95972 392 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 CSF2P04141 144 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 JMJD7P0C870 316 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 NME1P15531 152 aaKnown RBP10.62□□□□□ -0.71
APH1B-208ENST00000560353 PRLRP16471 622 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 WT1P19544 449 aaPredicted RBP10.62□□□□□ -0.71
APH1B-208ENST00000560353 GGCXP38435 758 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 NNMTP40261 264 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 CTSOP43234 321 aaPredicted RBP10.62□□□□□ -0.71
APH1B-208ENST00000560353 CNTN1Q12860 1018 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 PERM1Q5SV97 790 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 Q6ZSR6 202 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 SLC22A18ASQ8N1D0 253 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 XXYLT1Q8NBI6 393 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 HJURPQ8NCD3 748 aaPredicted RBP10.62□□□□□ -0.71
APH1B-208ENST00000560353 RNF139Q8WU17 664 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 IL12RB2Q99665 862 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 MYOCQ99972 504 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 CCDC3Q9BQI4 270 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 NT5C1AQ9BXI3 368 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 UBXN6Q9BZV1 441 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 SYNDIG1Q9H7V2 258 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 CAAP1Q9H8G2 361 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 STIM2Q9P246 746 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 PCDHB3Q9Y5E6 796 aa10.62□□□□□ -0.71
APH1B-208ENST00000560353 COL27A1Q8IZC6 1860 aaPredicted RBP10.61□□□□□ -0.71
APH1B-208ENST00000560353 A0A1W2PQ27 194 aa10.61□□□□□ -0.71
APH1B-208ENST00000560353 A0A1W2PQ64 194 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms