RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 FTLP02792 175 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-213ENST00000560175 ITPKAP23677 461 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 HNRNPH3P31942 346 aaKnown RBP13.57□□□□□ -0.24
SMAD3-213ENST00000560175 AIF1P55008 147 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 ZBED6P86452 979 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 KLHL30Q0D2K2 578 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 ARL13BQ3SXY8 428 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 RNF219Q5W0B1 726 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-213ENST00000560175 LYSMD4Q5XG99 296 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 DNAJC24Q6P3W2 148 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 USP30Q70CQ3 517 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 ERMP1Q7Z2K6 904 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 NLRP14Q86W24 1093 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 C1orf216Q8TAB5 229 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 FNIP1Q8TF40 1166 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 FAM172AQ8WUF8 416 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 FOXJ1Q92949 421 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 FAM131CQ96AQ9 280 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 RPL10LQ96L21 214 aaKnown RBP13.57□□□□□ -0.24
SMAD3-213ENST00000560175 MAGEB5Q9BZ81 275 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 ZYG11BQ9C0D3 744 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 SMOC1Q9H4F8 434 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 SEPT11Q9NVA2 429 aaKnown RBP13.57□□□□□ -0.24
SMAD3-213ENST00000560175 PARVAQ9NVD7 372 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 MPP6Q9NZW5 540 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 IFNKQ9P0W0 207 aa13.57□□□□□ -0.24
SMAD3-213ENST00000560175 CNOT1A5YKK6 2376 aaKnown RBP13.57□□□□□ -0.24
SMAD3-213ENST00000560175 A0A0D9SEW6 157 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-213ENST00000560175 LNP1A1A4G5 178 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 TMEM191CA6NGB0 347 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 PATE3B3GLJ2 98 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 FAM72CH0Y354 149 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 KHNYNO15037 678 aaKnown RBP13.56□□□□□ -0.24
SMAD3-213ENST00000560175 CCP110O43303 1012 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 ZMPSTE24O75844 475 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 GYPCP04921 128 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 ACADMP11310 421 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 SKILP12757 684 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 L1CAMP32004 1257 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 NNMTP40261 264 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 STK19P49842 368 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-213ENST00000560175 IRX4P78413 519 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 OGDHQ02218 1023 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 SEMA3BQ13214 749 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 CDO1Q16878 200 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 C6orf118Q5T5N4 469 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 FAM72AQ5TYM5 149 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 ZNF776Q68DI1 518 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-213ENST00000560175 FAM72DQ6L9T8 149 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 FAM72BQ86X60 149 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 DRC7Q8IY82 874 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 SH2D3CQ8N5H7 860 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 CCDC185Q8N715 623 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 C12orf50Q8NA57 414 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-213ENST00000560175 CEP76Q8TAP6 659 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 PIGKQ92643 395 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 MCEEQ96PE7 176 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 CAPN10Q9HC96 672 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 TMEM248Q9NWD8 314 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 ADAMTS1Q9UHI8 967 aa13.56□□□□□ -0.24
SMAD3-213ENST00000560175 ASCC3Q8N3C0 2202 aaKnown RBP13.56□□□□□ -0.24
SMAD3-213ENST00000560175 CDX4O14627 284 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-213ENST00000560175 SRGAP2O75044 1071 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 NDUFS2O75306 463 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 LRIG2O94898 1065 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 SERPING1P05155 500 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 RHOCP08134 193 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 PLEKP08567 350 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-213ENST00000560175 SERPINF2P08697 491 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 RHOQP17081 205 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 OR1E1P30953 314 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 ACSL1P33121 698 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 KRT83P78385 493 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 SLC20A2Q08357 652 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 ELAVL3Q14576 367 aaKnown RBP13.55□□□□□ -0.24
SMAD3-213ENST00000560175 NFKBIBQ15653 356 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 CST6Q15828 149 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 DUOXA1Q1HG43 343 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 TCEAL6Q6IPX3 200 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 RABEPKQ7Z6M1 372 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 SLFN11Q7Z7L1 901 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 ARFGAP1Q8N6T3 406 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 DCAF4L2Q8NA75 395 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 TCEAL3Q969E4 200 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 C2orf49Q9BVC5 232 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-213ENST00000560175 GPR174Q9BXC1 333 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 ACE2Q9BYF1 805 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-213ENST00000560175 XPO4Q9C0E2 1151 aaKnown RBP13.55□□□□□ -0.24
SMAD3-213ENST00000560175 PABPC3Q9H361 631 aaKnown RBP13.55□□□□□ -0.24
SMAD3-213ENST00000560175 SGK2Q9HBY8 427 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 VPS28Q9UK41 221 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 CDV3Q9UKY7 258 aaKnown RBP13.55□□□□□ -0.24
SMAD3-213ENST00000560175 FZD10Q9ULW2 581 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 NENFQ9UMX5 172 aa13.55□□□□□ -0.24
SMAD3-213ENST00000560175 LUC7L2Q9Y383 392 aaKnown RBP13.55□□□□□ -0.24
SMAD3-213ENST00000560175 ADAMTS9Q9P2N4 1935 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 PCNX2A6NKB5 2137 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 WASH4PA8MWX3 477 aa13.54□□□□□ -0.24
SMAD3-213ENST00000560175 MCF2LO15068 1137 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms