RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 FAM72AQ5TYM5 149 aa18.24■□□□□ 0.51
SNX1-208ENST00000559844 SDHAF4Q5VUM1 108 aa18.24■□□□□ 0.51
SNX1-208ENST00000559844 FAM72DQ6L9T8 149 aa18.24■□□□□ 0.51
SNX1-208ENST00000559844 CCDC149Q6ZUS6 474 aa18.24■□□□□ 0.51
SNX1-208ENST00000559844 DENND5BQ6ZUT9 1274 aa18.24■□□□□ 0.51
SNX1-208ENST00000559844 FAM72BQ86X60 149 aa18.24■□□□□ 0.51
SNX1-208ENST00000559844 LRRC34Q8IZ02 419 aa18.24■□□□□ 0.51
SNX1-208ENST00000559844 DCAKDQ8WVC6 231 aa18.24■□□□□ 0.51
SNX1-208ENST00000559844 MRRFQ96E11 262 aaKnown RBP18.24■□□□□ 0.51
SNX1-208ENST00000559844 CFAP36Q96G28 342 aa18.24■□□□□ 0.51
SNX1-208ENST00000559844 MYO16Q9Y6X6 1858 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 TRIM66O15016 1216 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 HTR7P34969 479 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 IL9RQ01113 521 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 MPP2Q14168 576 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 YTHDF3Q7Z739 585 aaKnown RBP18.23■□□□□ 0.51
SNX1-208ENST00000559844 VN1R2Q8NFZ6 395 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 SCAMP5Q8TAC9 235 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 GPR152Q8TDT2 470 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 ALKBH8Q96BT7 664 aaKnown RBP18.23■□□□□ 0.51
SNX1-208ENST00000559844 C8orf48Q96LL4 319 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 MAGEB18Q96M61 343 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 ARHGEF38Q9NXL2 777 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 SAMD15Q9P1V8 674 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 IGSF9Q9P2J2 1179 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 OR12D3Q9UGF7 316 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 DOCK6Q96HP0 2047 aa18.23■□□□□ 0.51
SNX1-208ENST00000559844 I6L893 689 aaPredicted RBP18.22■□□□□ 0.51
SNX1-208ENST00000559844 IRAK2O43187 625 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 ATF6P18850 670 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 ALDH1A3P47895 512 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 RPL10AP62906 217 aaKnown RBP18.22■□□□□ 0.51
SNX1-208ENST00000559844 PPIDQ08752 370 aaKnown RBP18.22■□□□□ 0.51
SNX1-208ENST00000559844 IFRD2Q12894 506 aaPredicted RBP18.22■□□□□ 0.51
SNX1-208ENST00000559844 ZNF534Q76KX8 674 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 AGGF1Q8N302 714 aaeCLIP18.22■□□□□ 0.51
SNX1-208ENST00000559844 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 SLC44A1Q8WWI5 657 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 EBNA1BP2Q99848 306 aaKnown RBP18.22■□□□□ 0.51
SNX1-208ENST00000559844 SMOC2Q9H3U7 446 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 DPP7Q9UHL4 492 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 INHBAP08476 426 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 TWF1Q12792 350 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 EIF4EBP2Q13542 120 aaPredicted RBP18.22■□□□□ 0.51
SNX1-208ENST00000559844 KCNC3Q14003 757 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 PPM1LQ5SGD2 360 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 ELMSAN1Q6PJG2 1045 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 ARHGAP18Q8N392 663 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 EFHBQ8N7U6 833 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 HDAC11Q96DB2 347 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 CABS1Q96KC9 395 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 HAPLN3Q96S86 360 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 FBXO44Q9H4M3 255 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 BRWD1Q9NSI6 2320 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 SEPT10Q9P0V9 454 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 TTLL3Q9Y4R7 772 aa18.22■□□□□ 0.51
SNX1-208ENST00000559844 LINC01565O15544 149 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 GLP2RO95838 553 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 LRG1P02750 347 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 PRKCHP24723 683 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 EPHB2P29323 1055 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 WASHC5Q12768 1159 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 SPARCL1Q14515 664 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 KBTBD12Q3ZCT8 623 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 LRRC8BQ6P9F7 803 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 PIGWQ7Z7B1 504 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 ANKS4BQ8N8V4 417 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 CCDC197Q8NCU1 140 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 GSDMBQ8TAX9 411 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 GIPC2Q8TF65 315 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 CASP10Q92851 521 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 SIGLEC10Q96LC7 697 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 VAT1Q99536 393 aa18.21■□□□□ 0.51
SNX1-208ENST00000559844 GOLGA6L7A0A1B0GV03 622 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 SPAG7O75391 227 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 RFPL2O75678 378 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 LRIG2O94898 1065 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 ZWINTO95229 277 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 APOEP02649 317 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 FOSL2P15408 326 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 CCR1P32246 355 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 CORO7P57737 925 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 COG7P83436 770 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 GALNT2Q10471 571 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 LGSNQ5TDP6 509 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 C6orf89Q6UWU4 347 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 SLC26A11Q86WA9 606 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 CCNJLQ8IV13 435 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 ZNF567Q8N184 647 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 C4orf33Q8N1A6 199 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 NUP93Q8N1F7 819 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 GDAP1Q8TB36 358 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 DENND1AQ8TEH3 1009 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 MZB1Q8WU39 189 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 ZNF180Q9UJW8 692 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 SCML2Q9UQR0 700 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 MAD1L1Q9Y6D9 718 aa18.21■□□□□ 0.5
SNX1-208ENST00000559844 C2orf16Q68DN1 1984 aa18.2■□□□□ 0.5
SNX1-208ENST00000559844 A0A1W2PPM1 405 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms