RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 KIAA1551Q9HCM1 1747 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 PTPRJQ12913 1337 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 SDR42E2A6NKP2 422 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 MAP3K13O43283 966 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 USP12O75317 370 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 JAM2P57087 298 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 PDAP1Q13442 181 aaKnown RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 QPCTQ16769 361 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 CRYBG2Q8N1P7 616 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 FIZ1Q96SL8 496 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 KLF6Q99612 283 aaPredicted RBP10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 CLDND1Q9NY35 253 aa10.88□□□□□ -0.67
CARMIL3-202ENST00000559694 TAF1LQ8IZX4 1826 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 E2F8A0AVK6 867 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 A8MX80 341 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 FGF10O15520 208 aaPredicted RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 HSPA4LO95757 839 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 SFSWAPQ12872 951 aaKnown RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 POU6F1Q14863 301 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 ARHGAP17Q68EM7 881 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 MFSD5Q6N075 450 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 LVRNQ6Q4G3 990 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 SERPINA13PQ6UXR4 307 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 ZNF662Q6ZS27 426 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 STRADAQ7RTN6 431 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 APLFQ8IW19 511 aaPredicted RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 SNX19Q92543 992 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 CDC42EP4Q9H3Q1 356 aaKnown RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 PDP2Q9P2J9 529 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 NOCTQ9UK39 431 aaKnown RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 TIMP1P01033 207 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 GJA1P17302 382 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 CORO1AP31146 461 aaKnown RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 DAOAP59103 153 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 SOX4Q06945 474 aaPredicted RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 OVGP1Q12889 678 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 HIC1Q14526 733 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 KCTD19Q17RG1 926 aaPredicted RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 MARCH8Q5T0T0 291 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 IFNLR1Q8IU57 520 aaPredicted RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 NUDCD3Q8IVD9 361 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 STK32AQ8WU08 396 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 FAXDC2Q96IV6 333 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 PAAF1Q9BRP4 392 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 SLC38A8A6NNN8 435 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 RBAK-RBAKDNI3L0D1 243 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 PMM2O15305 246 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 GPD2P43304 727 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 MMP13P45452 471 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 ART3Q13508 389 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 BRMS1LQ5PSV4 323 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 TPGS2Q68CL5 300 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 NLRP9Q7RTR0 991 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 HJURPQ8NCD3 748 aaPredicted RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 IGSF21Q96ID5 467 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 ELMO2Q96JJ3 720 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 MAGEB18Q96M61 343 aa10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 FAM124BQ9H5Z6 455 aaPredicted RBP10.87□□□□□ -0.67
CARMIL3-202ENST00000559694 A0A1W2PRU2 124 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 IGSF6O95976 241 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 DRD4P21917 467 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 CST5P28325 142 aaPredicted RBP10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 SPRP35270 261 aaPredicted RBP10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 SYTL3Q4VX76 610 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 RFWD3Q6PCD5 774 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 OSTM1Q86WC4 334 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 ZNF557Q8N988 423 aaPredicted RBP10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 KLHL23Q8NBE8 558 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 FAM136AQ96C01 138 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 PGM2Q96G03 612 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 NSL1Q96IY1 281 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 TTYH3Q9C0H2 523 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 BRD8Q9H0E9 1235 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 WWP1Q9H0M0 922 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 PCDH9Q9HC56 1237 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 RHBDL2Q9NX52 303 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 GDAP2Q9NXN4 497 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 FAM50BQ9Y247 325 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 CPQQ9Y646 472 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 COL4A1P02462 1669 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 FAM155AB1AL88 458 aaPredicted RBP10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 TBX18O95935 607 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 CHEK2O96017 543 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 GFAPP14136 432 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 CHRNB2P17787 502 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 ALDH18A1P54886 795 aaKnown RBP10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 BCL2L1Q07817 233 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 CLEC20AQ6ZU45 233 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 APTXQ7Z2E3 356 aaKnown RBP10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 CHPFQ8IZ52 775 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 ANKLE1Q8NAG6 615 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 CLEC4CQ8WTT0 213 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 EXOC2Q96KP1 924 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 BTN2A3PQ96KV6 586 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 TMEM237Q96Q45 408 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 SLC9A7Q96T83 725 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 GPR62Q9BZJ7 368 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 MARCOQ9UEW3 520 aaPredicted RBP10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 SNX3O60493 162 aa10.86□□□□□ -0.67
CARMIL3-202ENST00000559694 ZSCAN5DPP0CG00 497 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms