RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 HSF5Q4G112 596 aaPredicted RBP22.23■■□□□ 1.15
SNX1-206ENST00000559389 EMC10Q5UCC4 262 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 REXO1L1PQ8IX06 675 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 OR7D4Q8NG98 312 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 SORCS1Q8WY21 1168 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 KLC2Q9H0B6 622 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 AMFRQ9UKV5 643 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.23■■□□□ 1.15
SNX1-206ENST00000559389 PCDHA3Q9Y5H8 950 aa22.23■■□□□ 1.15
SNX1-206ENST00000559389 DLDP09622 509 aaKnown RBP22.22■■□□□ 1.15
SNX1-206ENST00000559389 AMPD1P23109 780 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 TIE1P35590 1138 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 PTPRNQ16849 979 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 C2orf27AQ580R0 203 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 AFMIDQ63HM1 303 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 IL17RCQ8NAC3 791 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 PCDH19Q8TAB3 1148 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 ACDQ96AP0 544 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 ALS2CR12Q96Q35 445 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 MAGEH1Q9H213 219 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 ZDHHC4Q9NPG8 344 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 MFHAS1Q9Y4C4 1052 aa22.22■■□□□ 1.15
SNX1-206ENST00000559389 MIF4GDA9UHW6 222 aaKnown RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 ATP5BP06576 529 aaKnown RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 ACVRL1P37023 503 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 NUMBP49757 651 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 NDST2P52849 883 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 YBEYP58557 167 aaPredicted RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 ENPP2Q13822 863 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 ZNF234Q14588 700 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 E2F5Q15329 346 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 TAZQ16635 292 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 PARP15Q460N3 678 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 ANKRD20A8PQ5CZ79 823 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 TMCO3Q6UWJ1 677 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 TRMT11Q7Z4G4 463 aaKnown RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 ALLCQ8N6M5 410 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 EXD1Q8NHP7 514 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 CYB5D2Q8WUJ1 264 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 ALG3Q92685 438 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 ARHGEF2Q92974 986 aaKnown RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 RNF25Q96BH1 459 aaPredicted RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 RBM41Q96IZ5 413 aaKnown RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 ACOX2Q99424 681 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 C2orf49Q9BVC5 232 aaPredicted RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 ACE2Q9BYF1 805 aaPredicted RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 LRRC19Q9H756 370 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 ETNK2Q9NVF9 386 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 THAP10Q9P2Z0 257 aaPredicted RBP22.21■■□□□ 1.15
SNX1-206ENST00000559389 VPS51Q9UID3 782 aa22.21■■□□□ 1.15
SNX1-206ENST00000559389 RASA4BC9J798 803 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 NPC1O15118 1278 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 RASA4O43374 803 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 KLF8O95600 359 aaPredicted RBP22.2■■□□□ 1.14
SNX1-206ENST00000559389 AVPR2P30518 371 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 CTSOP43234 321 aaPredicted RBP22.2■■□□□ 1.14
SNX1-206ENST00000559389 SULT2A1Q06520 285 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 MTAPQ13126 283 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 POLD3Q15054 466 aaPredicted RBP22.2■■□□□ 1.14
SNX1-206ENST00000559389 ODF2Q5BJF6 829 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 NCBP2-AS2Q69YL0 99 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 MFSD7Q6UXD7 560 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 ARHGAP12Q8IWW6 846 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 SPEM1Q8N4L4 309 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 LZTR1Q8N653 840 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 PQLC3Q8N755 202 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 TRIM58Q8NG06 486 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 MYO19Q96H55 970 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 HES6Q96HZ4 224 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 MRGPRX3Q96LB0 322 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 RNF157Q96PX1 679 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 ATP13A1Q9HD20 1204 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 MMP17Q9ULZ9 603 aa22.2■■□□□ 1.14
SNX1-206ENST00000559389 PACSIN2Q9UNF0 486 aaPredicted RBP22.2■■□□□ 1.14
SNX1-206ENST00000559389 SNAP91O60641 907 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 ADAM23O75077 832 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 ATG13O75143 517 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 ZMPSTE24O75844 475 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 SRPRAP08240 638 aaKnown RBP22.19■■□□□ 1.14
SNX1-206ENST00000559389 NTSR1P30989 418 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 SERPINB6P35237 376 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 IL12RB1P42701 662 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 CDKN2BP42772 138 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 PEX5P50542 639 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 ECT2LQ008S8 904 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 IL31Q6EBC2 164 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 SPOCD1Q6ZMY3 1216 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 CHPFQ8IZ52 775 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 CCDC33Q8N5R6 958 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 TXNDC5Q8NBS9 432 aaKnown RBP22.19■■□□□ 1.14
SNX1-206ENST00000559389 HMCESQ96FZ2 354 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 CELF6Q96J87 481 aaKnown RBP22.19■■□□□ 1.14
SNX1-206ENST00000559389 GABRG3Q99928 467 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 SPON2Q9BUD6 331 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 TRMT1Q9NXH9 659 aaKnown RBP22.19■■□□□ 1.14
SNX1-206ENST00000559389 CACNA2D2Q9NY47 1150 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 ERVW-1Q9UQF0 538 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 STON1Q9Y6Q2 735 aa22.19■■□□□ 1.14
SNX1-206ENST00000559389 NYNRINQ9P2P1 1898 aaKnown RBP22.19■■□□□ 1.14
SNX1-206ENST00000559389 USP27XA6NNY8 438 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms