RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 PPP2CAP67775 309 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 KCNMA1Q12791 1236 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 VWA3BQ502W6 1294 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 DBX2Q6ZNG2 339 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 SND1Q7KZF4 910 aaKnown RBP eCLIP21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 KDM1BQ8NB78 822 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 OR2T34Q8NGX1 318 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 ALG14Q96F25 216 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 NOX5Q96PH1 765 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 PDCL3Q9H2J4 239 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 CLSTN2Q9H4D0 955 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 OSGEPQ9NPF4 335 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 PIGVQ9NUD9 493 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 ASNSD1Q9NWL6 643 aa21.1■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3DA0A087WVF3 549 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3IA0A087WXS9 549 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3EA0A087X179 549 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3KA0A087X1G2 549 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 FAM149AA5PLN7 773 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 FAM221BA6H8Z2 402 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3FA6NER0 549 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3LB9A6J9 549 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 I6L893 689 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 CBX4O00257 560 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 RTN2O75298 545 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3HP0C7X1 549 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 GOT1P17174 413 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 DRD3P35462 400 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 SULT1E1P49888 294 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 CCT8P50990 548 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 RACK1P63244 317 aaKnown RBP21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 ZNF177Q13360 481 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 DRAP1Q14919 205 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3GQ6DHY5 549 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3CQ6IPX1 549 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 GLRX5Q86SX6 157 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TBC1D3Q8IZP1 549 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 FRS2Q8WU20 508 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 TUBGCP2Q9BSJ2 902 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 FEM1AQ9BSK4 669 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 ACE2Q9BYF1 805 aaPredicted RBP21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 SAMSN1Q9NSI8 373 aaKnown RBP21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 ADAMTS1Q9UHI8 967 aa21.09■□□□□ 0.97
TSPAN3-206ENST00000559373 CHD5Q8TDI0 1954 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 ADH1BP00325 375 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 C5AR1P21730 350 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 NOS2P35228 1153 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 SLC12A1Q13621 1099 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 SUZ12Q15022 739 aaKnown RBP21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 DLG2Q15700 870 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 ALFQ53S48 1182 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 CCNI2Q6ZMN8 369 aaPredicted RBP21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 Q6ZVU0 165 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 SLC26A9Q7LBE3 791 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 FAM71AQ8IYT1 594 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 MDM1Q8TC05 714 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 SERAC1Q96JX3 654 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 TKTL2Q9H0I9 626 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 CHMP5Q9NZZ3 219 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 SLC25A13Q9UJS0 675 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 VPS28Q9UK41 221 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 FZD4Q9ULV1 537 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 PCDHGB2Q9Y5G2 931 aa21.08■□□□□ 0.97
TSPAN3-206ENST00000559373 LAMA5O15230 3695 aa21.08■□□□□ 0.96
TSPAN3-206ENST00000559373 CACNA1GO43497 2377 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 COL5A1P20908 1838 aaPredicted RBP21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 VILLO15195 856 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 SNAP91O60641 907 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 MT-CO1P00395 513 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 CAPNS1P04632 268 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 CD38P28907 300 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 PLK1P53350 603 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 TTC39BQ5VTQ0 682 aaPredicted RBP21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 LRSAM1Q6UWE0 723 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 TBCBQ99426 244 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 NPY6RQ99463 290 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 CDC6Q99741 560 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 MUC3BQ9H195 1237 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 WDCPQ9H6R7 721 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 CA5BQ9Y2D0 317 aa21.07■□□□□ 0.96
TSPAN3-206ENST00000559373 APC2O95996 2303 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 GOLGA8SH3BPF8 625 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 CYP11B1P15538 503 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 ZNF18P17022 549 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 CLDN6P56747 220 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 SULT2A1Q06520 285 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 SFSWAPQ12872 951 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 ELAVL3Q14576 367 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 SHBQ15464 509 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 FAM102AQ5T9C2 384 aaPredicted RBP21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 TFAP2DQ7Z6R9 452 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 PHLDB2Q86SQ0 1253 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 FAM114A1Q8IWE2 563 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 OR8D1Q8WZ84 308 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 SPAG5Q96R06 1193 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 MPP6Q9NZW5 540 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 OR51B4Q9Y5P0 310 aa21.06■□□□□ 0.96
TSPAN3-206ENST00000559373 ITPR1Q14643 2758 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms