RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ZBTB16Q05516 673 aa11.98□□□□□ -0.49
CASC4-208ENST00000559151 TBCEQ15813 527 aaPredicted RBP11.98□□□□□ -0.49
CASC4-208ENST00000559151 ITPRIPL1Q6GPH6 555 aa11.98□□□□□ -0.49
CASC4-208ENST00000559151 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
CASC4-208ENST00000559151 CNOT9Q92600 299 aaKnown RBP11.98□□□□□ -0.49
CASC4-208ENST00000559151 OSGIN2Q9Y236 505 aa11.98□□□□□ -0.49
CASC4-208ENST00000559151 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.97□□□□□ -0.49
CASC4-208ENST00000559151 CHMP24386 653 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 GJC1P36383 396 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 SOX2P48431 317 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 B4GALNT4Q76KP1 1039 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 DIS3L2Q8IYB7 885 aaKnown RBP11.97□□□□□ -0.49
CASC4-208ENST00000559151 C16orf71Q8IYS4 520 aaPredicted RBP11.97□□□□□ -0.49
CASC4-208ENST00000559151 P2RY11Q96G91 374 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 KRTAP9-2Q9BYQ4 174 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 PDCL3Q9H2J4 239 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 TAS2R10Q9NYW0 307 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 HCN3Q9P1Z3 774 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 SARDHQ9UL12 918 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 HS3ST3A1Q9Y663 406 aa11.97□□□□□ -0.49
CASC4-208ENST00000559151 PI4KAP2A4QPH2 592 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 TEX22C9J3V5 150 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 AKR1A1P14550 325 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 GPD1P21695 349 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 INO80CQ6PI98 192 aaPredicted RBP11.96□□□□□ -0.49
CASC4-208ENST00000559151 CHSY1Q86X52 802 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 Q8N1X5 172 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 OR52N4Q8NGI2 321 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 IP6K1Q92551 441 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 SARAFQ96BY9 339 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 Q9N2J8 555 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 MLXIPLQ9NP71 852 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 MYRFQ9Y2G1 1151 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 WNT6Q9Y6F9 365 aa11.96□□□□□ -0.49
CASC4-208ENST00000559151 TDRD9Q8NDG6 1382 aaKnown RBP11.95□□□□□ -0.5
CASC4-208ENST00000559151 TCRBV7S3A2A0A539 114 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 FSD2A1L4K1 749 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 HBP1O60381 514 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 ZBED4O75132 1171 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 CHRM5P08912 532 aaPredicted RBP11.95□□□□□ -0.5
CASC4-208ENST00000559151 ST6GAL1P15907 406 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 TNFRSF1AP19438 455 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 PROZP22891 400 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 RGS2P41220 211 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 PTPN9P43378 593 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 SLC18A3Q16572 532 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 CPLX4Q7Z7G2 160 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 PNLDC1Q8NA58 520 aaKnown RBP11.95□□□□□ -0.5
CASC4-208ENST00000559151 SETD9Q8NE22 299 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 METTL6Q8TCB7 284 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 FCRL5Q96RD9 977 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 SLC32A1Q9H598 525 aa11.95□□□□□ -0.5
CASC4-208ENST00000559151 ANKRD18BA2A2Z9 1011 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 TMEM232C9JQI7 657 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 TNFSF14O43557 240 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 GFPT2O94808 682 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 SGPL1O95470 568 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 UBL4AP11441 157 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 UFM1P61960 85 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 RHAGQ02094 409 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 MTA1Q13330 715 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 PDE1CQ14123 709 aaPredicted RBP11.94□□□□□ -0.5
CASC4-208ENST00000559151 FBXO43Q4G163 708 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 ZNF667Q5HYK9 610 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 PAQR4Q8N4S7 273 aaPredicted RBP11.94□□□□□ -0.5
CASC4-208ENST00000559151 PLD5Q8N7P1 536 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 TM2D2Q9BX73 214 aa11.94□□□□□ -0.5
CASC4-208ENST00000559151 CADM1Q9BY67 442 aaKnown RBP11.94□□□□□ -0.5
CASC4-208ENST00000559151 KDM3AQ9Y4C1 1321 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 A0A087X1B8 175 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 A6NCN8 305 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 CHRM4P08173 479 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 TACR2P21452 398 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 CERKLQ49MI3 558 aaPredicted RBP11.93□□□□□ -0.5
CASC4-208ENST00000559151 ZNF362Q5T0B9 420 aaPredicted RBP11.93□□□□□ -0.5
CASC4-208ENST00000559151 FASTKD5Q7L8L6 764 aaKnown RBP11.93□□□□□ -0.5
CASC4-208ENST00000559151 UEVLDQ8IX04 471 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 CNTROBQ8N137 903 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 SCAIQ8N9R8 606 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 ZFPM2Q8WW38 1151 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 PIGKQ92643 395 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 C5orf34Q96MH7 638 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 KCND2Q9NZV8 630 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 TBC1D14Q9P2M4 693 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 MAFFQ9ULX9 164 aa11.93□□□□□ -0.5
CASC4-208ENST00000559151 B8ZZF3 427 aa11.92□□□□□ -0.5
CASC4-208ENST00000559151 CLEC3BP05452 202 aa11.92□□□□□ -0.5
CASC4-208ENST00000559151 EFNB1P98172 346 aa11.92□□□□□ -0.5
CASC4-208ENST00000559151 SETQ01105 290 aaPredicted RBP11.92□□□□□ -0.5
CASC4-208ENST00000559151 SNX30Q5VWJ9 437 aa11.92□□□□□ -0.5
CASC4-208ENST00000559151 RBM44Q6ZP01 1051 aaKnown RBP11.92□□□□□ -0.5
CASC4-208ENST00000559151 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
CASC4-208ENST00000559151 KLBQ86Z14 1044 aa11.92□□□□□ -0.5
CASC4-208ENST00000559151 NEUROD6Q96NK8 337 aa11.92□□□□□ -0.5
CASC4-208ENST00000559151 NR1H4Q96RI1 486 aaPredicted RBP11.92□□□□□ -0.5
CASC4-208ENST00000559151 TREX2Q9BQ50 279 aaPredicted RBP11.92□□□□□ -0.5
CASC4-208ENST00000559151 FRMD8Q9BZ67 464 aaPredicted RBP11.92□□□□□ -0.5
CASC4-208ENST00000559151 PCDHB16Q9NRJ7 776 aa11.92□□□□□ -0.5
CASC4-208ENST00000559151 KRTAP9-6A0A140TA67 174 aa11.91□□□□□ -0.5
CASC4-208ENST00000559151 KRTAP9-7A8MTY7 169 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms