RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 EEFSECP57772 596 aaKnown RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 KRTAP10-9P60411 292 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 RPL7AP62424 266 aaKnown RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 GPC5P78333 572 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 TMEM115Q12893 351 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 LMAN2Q12907 356 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ACVR2BQ13705 512 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 BECN1Q14457 450 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 CRYMQ14894 314 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 MFSD13AQ14CX5 517 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 RASA2Q15283 850 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 PRICKLE4Q2TBC4 344 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ALDH1L2Q3SY69 923 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 GLE1Q53GS7 698 aaKnown RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ZNF667Q5HYK9 610 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 PCID2Q5JVF3 399 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 LAIR1Q6GTX8 287 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 TMEM81Q6P7N7 255 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 INO80CQ6PI98 192 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 KCNV1Q6PIU1 500 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 CYP20A1Q6UW02 462 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 CRELD2Q6UXH1 353 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 SERPINA13PQ6UXR4 307 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 GSTA5Q7RTV2 222 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ZNF551Q7Z340 670 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 GALNT7Q86SF2 657 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 GPR149Q86SP6 731 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 TMEM200AQ86VY9 491 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 SCN4BQ8IWT1 228 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 TEX11Q8IYF3 940 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 CCDC105Q8IYK2 499 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 LCORLQ8N3X6 602 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 LNX2Q8N448 690 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 SLC44A3Q8N4M1 653 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 WDTC1Q8N5D0 677 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 C12orf76Q8N812 135 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 BEND2Q8NDZ0 799 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 CADM4Q8NFZ8 388 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 RP9Q8TA86 221 aaKnown RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 RAB40AQ8WXH6 277 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 HSPH1Q92598 858 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ATP2A3Q93084 1043 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 INTS12Q96CB8 462 aaKnown RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 CTHRC1Q96CG8 243 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 FEM1CQ96JP0 617 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 PBKQ96KB5 322 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 Q96MF0 132 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 CMTM3Q96MX0 182 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ZMAT2Q96NC0 199 aaKnown RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 MMS19Q96T76 1030 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 BAG1Q99933 345 aaPredicted RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ADAM2Q99965 735 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 MUC13Q9H3R2 512 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 SH3GLB2Q9NR46 395 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 DUSP22Q9NRW4 184 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 RXFP3Q9NSD7 469 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 RRP7BPQ9NSQ0 103 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ARL8BQ9NVJ2 186 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ZDHHC7Q9NXF8 308 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ARL15Q9NXU5 204 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 KCTD5Q9NXV2 234 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 MPP6Q9NZW5 540 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ADAMTS5Q9UNA0 930 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 ST3GAL5Q9UNP4 418 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 SLC8A2Q9UPR5 921 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 B3GNT3Q9Y2A9 372 aa2.47□□□□□ -2.01
GABPB1-209ENST00000559100 REXO2Q9Y3B8 237 aaKnown RBP2.47□□□□□ -2.01
GABPB1-209ENST00000559100 CYP3A7-CYP3A51PA0A087WV96 503 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 A0A1W2PQ09 198 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 FAM170AA1A519 330 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 LIPT2A6NK58 231 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 LRRC53A6NM62 1247 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 GCOM1H8Y6P7 765 aaPredicted RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 MPPED1O15442 326 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 PROM1O43490 865 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 AKAP8O43823 692 aaKnown RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 PRICKLE3O43900 615 aaPredicted RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 DKC1O60832 514 aaKnown RBP eCLIP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 TACC1O75410 805 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 IL1AP01583 271 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 TUBB4AP04350 444 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 GALTP07902 379 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 CHRM4P08173 479 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 HOXB9P17482 250 aaPredicted RBP2.46□□□□□ -2.02
GABPB1-209ENST00000559100 PTMSP20962 102 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 CYP3A7P24462 503 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 MCM3P25205 808 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 NDUFS1P28331 727 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 ICAM3P32942 547 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 TTKP33981 857 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 FOLR3P41439 243 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 STAT6P42226 847 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 DPP6P42658 865 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 SELENOPP49908 381 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 OLR1P78380 273 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 PSG6Q00889 435 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 CDC16Q13042 620 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 STK4Q13043 487 aa2.46□□□□□ -2.02
GABPB1-209ENST00000559100 FRG1Q14331 258 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 638 ms