RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PLEKP08567 350 aaPredicted RBP8.71□□□□□ -1.02
TPM1-213ENST00000558400 ZNF806P0C7X5 589 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 RHOQP17081 205 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 PRKCHP24723 683 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 MZF1P28698 734 aaPredicted RBP8.71□□□□□ -1.02
TPM1-213ENST00000558400 CD6P30203 668 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 HOXD12P35452 270 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 ZNF135P52742 658 aaPredicted RBP8.71□□□□□ -1.02
TPM1-213ENST00000558400 HDAC4P56524 1084 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 LMNB2Q03252 620 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 EFHC2Q5JST6 749 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 SYCP2LQ5T4T6 812 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 SH3PXD2AQ5TCZ1 1133 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 PMS2CLQ68D20 193 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 CXorf57Q6NSI4 855 aaKnown RBP8.71□□□□□ -1.02
TPM1-213ENST00000558400 SARM1Q6SZW1 724 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 KIAA1324Q6UXG2 1013 aaKnown RBP8.71□□□□□ -1.02
TPM1-213ENST00000558400 TMC6Q7Z403 805 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 RABEPKQ7Z6M1 372 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 PSTKQ8IV42 348 aaKnown RBP8.71□□□□□ -1.02
TPM1-213ENST00000558400 CNGA4Q8IV77 575 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 VSTM4Q8IW00 320 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 ZNF683Q8IZ20 524 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 APCDD1Q8J025 514 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 RLN3Q8WXF3 142 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 ALG14Q96F25 216 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 TRIM5Q9C035 493 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 MKRN2Q9H000 416 aaKnown RBP8.71□□□□□ -1.02
TPM1-213ENST00000558400 PCED1AQ9H1Q7 454 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 ARRDC1-AS1Q9H2J1 176 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 PRSS16Q9NQE7 514 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 ANLNQ9NQW6 1124 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 VPS45Q9NRW7 570 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 TAS2R14Q9NYV8 317 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.71□□□□□ -1.02
TPM1-213ENST00000558400 LCMT1Q9UIC8 334 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 SLC25A13Q9UJS0 675 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 VPS28Q9UK41 221 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 INVSQ9Y283 1065 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 NCKAP1Q9Y2A7 1128 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 FRYLO94915 3013 aa8.71□□□□□ -1.02
TPM1-213ENST00000558400 IGHV1OR15-9A0A0B4J2B8 117 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 FAM170AA1A519 330 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 BCLAF3A2AJT9 711 aaKnown RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 I6L893 689 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 ATP9BO43861 1147 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 CNTN5O94779 1100 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 GJB6O95452 261 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 IGLV3-19P01714 112 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 DNTTP04053 509 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 HLA-EP13747 358 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 PSMA2P25787 234 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 MAPKAPK2P49137 400 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 DHPSP49366 369 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 TPMTP51580 245 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 COPAP53621 1224 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 GEMIN4P57678 1058 aaKnown RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 RPL6Q02878 288 aaKnown RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 CREB5Q02930 508 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 SPEM2Q0P670 501 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 CCDC15Q0P6D6 951 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 PIGHQ14442 188 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 TTC31Q49AM3 519 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 ACCSLQ4AC99 568 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 BOLA3Q53S33 107 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 ALFQ53S48 1182 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 CCDC122Q5T0U0 273 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 ERMARDQ5T6L9 678 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 FAM46CQ5VWP2 391 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 E4F1Q66K89 784 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 ZNF776Q68DI1 518 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 RETSATQ6NUM9 610 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 RWDD4Q6NW29 188 aaKnown RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 USP30Q70CQ3 517 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 DSG4Q86SJ6 1040 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 CIR1Q86X95 450 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 CADM4Q8NFZ8 388 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 CEP76Q8TAP6 659 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 ZNF653Q96CK0 615 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 TBC1D31Q96DN5 1066 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 MYO19Q96H55 970 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 ZNF419Q96HQ0 510 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 MRGPRX3Q96LB0 322 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 CCDC114Q96M63 670 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 DNAJC7Q99615 494 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 EPAS1Q99814 870 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 RSPH9Q9H1X1 276 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 MAGEH1Q9H213 219 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 DEF6Q9H4E7 631 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 CATSPERBQ9H7T0 1116 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 SEMA4GQ9NTN9 838 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 WSB2Q9NYS7 404 aaPredicted RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 MPP6Q9NZW5 540 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 USP36Q9P275 1121 aaKnown RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 SLCO3A1Q9UIG8 710 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 TPX2Q9ULW0 747 aaKnown RBP8.7□□□□□ -1.02
TPM1-213ENST00000558400 FZD10Q9ULW2 581 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 HPCAL4Q9UM19 191 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 USP18Q9UMW8 372 aa8.7□□□□□ -1.02
TPM1-213ENST00000558400 HS3ST2Q9Y278 367 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms