RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 TAS2R40P59535 323 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 AUHQ13825 339 aaKnown RBP12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 HADHQ16836 314 aaKnown RBP12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 ITPRIPL2Q3MIP1 535 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 KCNT1Q5JUK3 1230 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 ERMARDQ5T6L9 678 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 TXNRD3NBQ6F5E7 133 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 TMA16Q96EY4 203 aaKnown RBP12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 MYEOVQ96EZ4 313 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 HAPLN3Q96S86 360 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 SNRNP25Q9BV90 132 aaKnown RBP12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 BBS2Q9BXC9 721 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 GSX2Q9BZM3 304 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 DHX35Q9H5Z1 703 aaKnown RBP12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 TMEM51Q9NW97 253 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 LCMT1Q9UIC8 334 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 FBXL21Q9UKT6 434 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 CA14Q9ULX7 337 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 AP4E1Q9UPM8 1137 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 ALG6Q9Y672 507 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 UNC80Q8N2C7 3258 aa12.4□□□□□ -0.42
HMGB1P8-201ENST00000558211 MIA3Q5JRA6 1907 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 ARNTLO00327 626 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 ZSCAN12O43309 604 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 CREB3O43889 395 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 PALMO75781 387 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 ADH5P11766 374 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 TYRP14679 529 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 HADHBP55084 474 aaKnown RBP12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 RPS24P62847 133 aaKnown RBP12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 PFKPQ01813 784 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 GAD2Q05329 585 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 IFI16Q16666 785 aaKnown RBP12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 CA9Q16790 459 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 ATP13A4Q4VNC1 1196 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 MPPE1Q53F39 396 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 SLC44A4Q53GD3 710 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 FBXL22Q6P050 247 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 LRRC31Q6UY01 552 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 C1orf229Q6ZS94 237 aaPredicted RBP12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 CIR1Q86X95 450 aaPredicted RBP12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 FAM217AQ8IXS0 508 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 CPXM2Q8N436 756 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 KIAA1958Q8N8K9 716 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 KIAA1524Q8TCG1 905 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 IGSF8Q969P0 613 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 NTAN1Q96AB6 310 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 RPRD1AQ96P16 312 aaPredicted RBP12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 SLC2A4RGQ9NR83 387 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 KLHL11Q9NVR0 708 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 OR12D3Q9UGF7 316 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 GDF2Q9UK05 429 aaPredicted RBP12.39□□□□□ -0.43
HMGB1P8-201ENST00000558211 TYW5A2RUC4 315 aaKnown RBP12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 GRID2IPA4D2P6 1211 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 E9PAM4 449 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 FAM72CH0Y354 149 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 RARAP10276 462 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 MPSTP25325 297 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 MAN1A1P33908 653 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 GJA4P35212 333 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 SLC1A1P43005 524 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 SLC6A11P48066 632 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 SLC25A11Q02978 314 aaKnown RBP12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 MTA1Q13330 715 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 BOLA3Q53S33 107 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 PPP6R3Q5H9R7 873 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 RABGAP1LQ5R372 815 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 FAM72AQ5TYM5 149 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 FAM72DQ6L9T8 149 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 RWDD4Q6NW29 188 aaKnown RBP12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 CYP4V2Q6ZWL3 525 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 FAM72BQ86X60 149 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 CARNMT1Q8N4J0 409 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 GOLGA6L1Q8N7Z2 621 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 DNASE1L2Q92874 299 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 TRIM44Q96DX7 344 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 P2RY11Q96G91 374 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 C1orf74Q96LT6 269 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 PRICKLE1Q96MT3 831 aaPredicted RBP12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 MDFIQ99750 246 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 PRMT1Q99873 361 aaKnown RBP12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 OSBPL2Q9H1P3 480 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 MPP6Q9NZW5 540 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 KCNMB2Q9Y691 235 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 CAPN6Q9Y6Q1 641 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
HMGB1P8-201ENST00000558211 SPECC1L-ADORA2AF8WAN1 911 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 CNTN5O94779 1100 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 LRIG2O94898 1065 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 FTCDO95954 541 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 CD72P21854 359 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 IRAK1P51617 712 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 AIF1P55008 147 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 CDH6P55285 790 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 ZXDAP98168 799 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 SCAPQ12770 1279 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 KRT81Q14533 505 aa12.37□□□□□ -0.43
HMGB1P8-201ENST00000558211 ODF2Q5BJF6 829 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms