RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 DHX58Q96C10 678 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 IFT43Q96FT9 208 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 FAXDC2Q96IV6 333 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 LMLNQ96KR4 655 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 MRGPRX3Q96LB0 322 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 APOLD1Q96LR9 279 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 PPP1R9BQ96SB3 815 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 SEMA3CQ99985 751 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.36□□□□□ -1.55
SPG11-208ENST00000558155 BACH2Q9BYV9 841 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 ULBP1Q9BZM6 244 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 TRIM4Q9C037 500 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 MAGEF1Q9HAY2 307 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 DMAC2Q9NW81 257 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 WDR70Q9NW82 654 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 NLGN3Q9NZ94 848 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 NCKIPSDQ9NZQ3 722 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 ANKMY1Q9P2S6 941 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 TJP2Q9UDY2 1190 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 SLCO3A1Q9UIG8 710 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 CELSR3Q9NYQ7 3312 aa5.36□□□□□ -1.55
SPG11-208ENST00000558155 FREM2Q5SZK8 3169 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 DOPEY2Q9Y3R5 2298 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 ITIH6Q6UXX5 1313 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 CPED1A4D0V7 1026 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 CDRT15L2A8MXV6 281 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 C1QTNF3-AMACRE9PGA6 284 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 PDXKO00764 312 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 XPO1O14980 1071 aaKnown RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 MAPK13O15264 365 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 SLC31A1O15431 190 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 PLRG1O43660 514 aaKnown RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 CALUO43852 315 aaPredicted RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 LZTS3O60299 673 aaPredicted RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 RTN2O75298 545 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 TCEA3O75764 348 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 TNFSF15O95150 251 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 ITGB2P05107 769 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 GP1BBP13224 206 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 KRT13P13646 458 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 MZF1P28698 734 aaPredicted RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 SLC6A4P31645 630 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 AKT2P31751 481 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 RPIAP49247 311 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 SGSHP51688 502 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 VAMP7P51809 220 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 OXCT1P55809 520 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 TBX4P57082 545 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 HNRNPKP61978 463 aaKnown RBP eCLIP5.35□□□□□ -1.55
SPG11-208ENST00000558155 PPP2CBP62714 309 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 PPP2CAP67775 309 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 CLN3Q13286 438 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 SERINC3Q13530 473 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 SLC12A1Q13621 1099 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 UBAP2LQ14157 1087 aaKnown RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 STK38Q15208 465 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 E2F4Q16254 413 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 LINC00303Q3SY05 128 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 POM121L1PQ3SYA9 428 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 ACCSLQ4AC99 568 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 CEP135Q66GS9 1140 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 FOXR1Q6PIV2 292 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 RBM44Q6ZP01 1051 aaKnown RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 CLEC14AQ86T13 490 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 SIX6OS1Q8N1H7 587 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 ZSCAN1Q8NBB4 408 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 WDR48Q8TAF3 677 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 KCTD13Q8WZ19 329 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 OR8D1Q8WZ84 308 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 GLMNQ92990 594 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 SGF29Q96ES7 293 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 ATXN7L3BQ96GX2 97 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 RPL10LQ96L21 214 aaKnown RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 SPAG5Q96R06 1193 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 SRRTQ9BXP5 876 aaKnown RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 NIF3L1Q9GZT8 377 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 APOBEC3GQ9HC16 384 aaKnown RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 PREBQ9HCU5 417 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 CNGB3Q9NQW8 809 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 IGSF5Q9NSI5 407 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 STARD5Q9NSY2 213 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 UCKL1Q9NWZ5 548 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 HESX1Q9UBX0 185 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 SALL4Q9UJQ4 1053 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 INTS6Q9UL03 887 aaKnown RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 ATXN7L1Q9ULK2 861 aaPredicted RBP5.35□□□□□ -1.55
SPG11-208ENST00000558155 ENTPD2Q9Y5L3 495 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 HS3ST3A1Q9Y663 406 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 CSNK1G3Q9Y6M4 447 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 KIF26BQ2KJY2 2108 aa5.35□□□□□ -1.55
SPG11-208ENST00000558155 BPTFQ12830 3046 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 CCDC187A0A096LP49 1063 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.34□□□□□ -1.55
SPG11-208ENST00000558155 YJEFN3A6XGL0 299 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 E7ENQ6 273 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 H3BM21 787 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 TMX2-CTNND1H3BSU7 103 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 K7ESM1 405 aa5.34□□□□□ -1.55
SPG11-208ENST00000558155 SPTLC2O15270 562 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms