RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 ALX1Q15699 326 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CCNG2Q16589 344 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 IFNL3Q8IZI9 196 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 ENKURQ8TC29 256 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 SNAPC3Q92966 411 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 TESCQ96BS2 214 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CNDP2Q96KP4 475 aaKnown RBP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 GLTPQ9NZD2 209 aa11.25□□□□□ -0.61
SEMA4B-204ENST00000558065 CDK5RAP2Q96SN8 1893 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 NDST3O95803 873 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 IFNA16P05015 189 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 GP5P40197 560 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 TRIM32Q13049 653 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 MAPK11Q15759 364 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 KIAA1614Q5VZ46 1190 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 WDR49Q8IV35 697 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 PHTF2Q8N3S3 785 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 WDR48Q8TAF3 677 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 GMLQ99445 158 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 POP1Q99575 1024 aaKnown RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 PKP2Q99959 881 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 COPS7BQ9H9Q2 264 aaPredicted RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 GPN2Q9H9Y4 310 aaPredicted RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 RAVER2Q9HCJ3 691 aaKnown RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 PPARGC1AQ9UBK2 798 aaKnown RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 WBP11Q9Y2W2 641 aaKnown RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 ACOT9Q9Y305 439 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 PCDHGA2Q9Y5H1 932 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 PTPRMP28827 1452 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 LRRC37A3O60309 1634 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 A0A1W2PPM1 405 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 HTR7P34969 479 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 TMBIM6P55061 237 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 BNIP2Q12982 314 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 TOMM20Q15388 145 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 MAN2A1Q16706 1144 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 PPP4R3CPQ6ZMV5 832 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 CENPUQ71F23 418 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 COPS6Q7L5N1 327 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 LIMS2Q7Z4I7 341 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 SYCE1Q8N0S2 351 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 TMEM102Q8N9M5 508 aaPredicted RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 CMASQ8NFW8 434 aaPredicted RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 OR52H1Q8NGJ2 320 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 OR2T34Q8NGX1 318 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 ALG3Q92685 438 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 ZNF578Q96N58 590 aaPredicted RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 TRIM56Q9BRZ2 755 aaKnown RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 EFHD1Q9BUP0 239 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 ANKRD60Q9BZ19 345 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 TINAGL1Q9GZM7 467 aaPredicted RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 RAD54BQ9Y620 910 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 ASTN2O75129 1339 aaPredicted RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 SH3D21A4FU49 640 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 FAM155AB1AL88 458 aaPredicted RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 SLC5A1P13866 664 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 ATF7P17544 494 aaPredicted RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 QARSP47897 775 aaKnown RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 CYP4F2P78329 520 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 CYP4F3Q08477 520 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 LRRC74AQ0VAA2 488 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 GRM7Q14831 915 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 LTB4RQ15722 352 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 ZFP69Q49AA0 526 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 TMEM67Q5HYA8 995 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 GRTP1Q5TC63 336 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 PIWIL3Q7Z3Z3 882 aaKnown RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 XAGE3Q8WTP9 111 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 FAM167AQ96KS9 214 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 PWWP2AQ96N64 755 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 AMFRQ9UKV5 643 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 AGO1Q9UL18 857 aaKnown RBP11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 EDARQ9UNE0 448 aa11.24□□□□□ -0.61
SEMA4B-204ENST00000558065 TRIM75PA6NK02 468 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 GAS2O43903 313 aaKnown RBP11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 NOS1APO75052 506 aaPredicted RBP11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 NPPAP01160 153 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 AOC1P19801 751 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 DDCP20711 480 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 RPP38P78345 283 aaKnown RBP11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 UBAP2LQ14157 1087 aaKnown RBP11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 NRF1Q16656 503 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 IQCCQ4KMZ1 466 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 KRT80Q6KB66 452 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 PARP8Q8N3A8 854 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 ZNF680Q8NEM1 530 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 ST6GAL2Q96JF0 529 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 C12orf65Q9H3J6 166 aaKnown RBP11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 C8orf33Q9H7E9 229 aaPredicted RBP11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 DDX28Q9NUL7 540 aaKnown RBP11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 WHRNQ9P202 907 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 NAGPAQ9UK23 515 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 PTPN22Q9Y2R2 807 aa11.23□□□□□ -0.61
SEMA4B-204ENST00000558065 FMN2Q9NZ56 1722 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms