RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 SMAPO00193 183 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 CACNB4O00305 520 aaPredicted RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 OR10H2O60403 315 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 ACSL4O60488 711 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 RTP1P59025 263 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 ERVK-21P61565 698 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 FNDC5Q8NAU1 212 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 CARD9Q9H257 536 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 BLOC1S4Q9NUP1 217 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 STOML1Q9UBI4 398 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 SLC9A8Q9Y2E8 581 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 COL3A1P02461 1466 aaPredicted RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 RBP1P09455 135 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 TCEA1P23193 301 aaKnown RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 RPL9P32969 192 aaKnown RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 SERPINH1P50454 418 aaKnown RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 SRSF11Q05519 484 aaKnown RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 TUSC3Q13454 348 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 TRIM60Q495X7 471 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 PPP1R26Q5T8A7 1209 aaPredicted RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 LZTR1Q8N653 840 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 DEFB119Q8N690 84 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 RELTQ969Z4 430 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 RERGQ96A58 199 aaPredicted RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 GRAMD1AQ96CP6 724 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 CMTM5Q96DZ9 223 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 RIPOR3Q96MK2 946 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 ZIM3Q96PE6 472 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 GTPBP2Q9BX10 602 aaKnown RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 GMEB2Q9UKD1 530 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 KRT6AP02538 564 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 KRT6BP04259 564 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 ELK3P41970 407 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 KRT6CP48668 564 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 AP5B1Q2VPB7 878 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 LINGO4Q6UY18 593 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 CENPTQ96BT3 561 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 SEMA4BQ9NPR2 832 aaPredicted RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 IGF2BP3O00425 579 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 FFAR2O15552 330 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 KRT16P08779 473 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 KCTD19Q17RG1 926 aaPredicted RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 TMEM63BQ5T3F8 832 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 GDF6Q6KF10 455 aaPredicted RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 FAM151BQ6UXP7 276 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 DPY30Q9C005 99 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 TNKS2Q9H2K2 1166 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 KLHL2O95198 593 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 MDH1P40925 334 aaKnown RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 CYP4F8P98187 520 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 MMRN1Q13201 1228 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 C2orf27AQ580R0 203 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 CCNI2Q6ZMN8 369 aaPredicted RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 CHST9Q7L1S5 443 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 TMEM161BQ8NDZ6 487 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 IPCEF1Q8WWN9 437 aaPredicted RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 WRAP53Q9BUR4 548 aaKnown RBP13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 CD84Q9UIB8 345 aa13.92□□□□□ -0.18
SEMA6D-208ENST00000558014 SMIM35A0A1B0GVV1 85 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 CARNS1A5YM72 827 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 LRRC14BA6NHZ5 514 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 LGR5O75473 907 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 ATP6V1B2P21281 511 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 USP39Q53GS9 565 aaKnown RBP13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 ZNF655Q8N720 491 aaPredicted RBP13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 TNIP2Q8NFZ5 429 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 OR52K1Q8NGK4 314 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 METTL6Q8TCB7 284 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 MRIQ9BWK5 157 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 SLC4A5Q9BY07 1137 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 FBXO6Q9NRD1 293 aaPredicted RBP13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 CLIC5Q9NZA1 410 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 ARHGEF28Q8N1W1 1705 aaKnown RBP13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 PHGDHO43175 533 aaKnown RBP13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 GNRH1P01148 92 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 RPA3P35244 121 aaPredicted RBP13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 MGAT5Q09328 741 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 FAM35AQ86V20 835 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 TRIM69Q86WT6 500 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 CATSPER2Q96P56 530 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 ENTPD4Q9Y227 616 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 PER2O15055 1255 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 CLTBP09497 229 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 CORO1AP31146 461 aaKnown RBP13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 FEN1P39748 380 aaKnown RBP13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 GPR15P49685 360 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 C9orf57Q5W0N0 161 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 HAS1Q92839 578 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 IKZF4Q9H2S9 585 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 WDR47O94967 919 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 CPA3P15088 417 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 PPP2R1BP30154 601 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 DHPSP49366 369 aaPredicted RBP13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 E2F4Q16254 413 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 AADACL2Q6P093 401 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 ISCUQ9H1K1 167 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 ARHGAP20Q9P2F6 1191 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 OR10H1Q9Y4A9 318 aa13.91□□□□□ -0.18
SEMA6D-208ENST00000558014 DDX3XO00571 662 aaKnown RBP eCLIP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms