RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ERVW-1Q9UQF0 538 aa14.71□□□□□ -0.05
USP3-205ENST00000557884 A0A0A6YYK5 440 aaPredicted RBP14.7□□□□□ -0.06
USP3-205ENST00000557884 A0A1W2PQF6 199 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 H3BRJ5 948 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 FGF10O15520 208 aaPredicted RBP14.7□□□□□ -0.06
USP3-205ENST00000557884 SPOPO43791 374 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 RAMP2O60895 175 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 ASLP04424 464 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 EPHX1P07099 455 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 GLDCP23378 1020 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 DGKEP52429 567 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 PLK1P53350 603 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 PTPN5P54829 565 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 CDH6P55285 790 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 ST8SIA6P61647 398 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 GNA12Q03113 381 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 GSE1Q14687 1217 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 STARD3Q14849 445 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 DPYSL2Q16555 572 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 ANO7Q6IWH7 933 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 ZNF354CQ86Y25 554 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 NETO2Q8NC67 525 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 HMGB4Q8WW32 186 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 PPP1R9BQ96SB3 815 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 PCDH18Q9HCL0 1135 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 ATP13A1Q9HD20 1204 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 TRIM10Q9UDY6 481 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 VPS51Q9UID3 782 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 SLCO3A1Q9UIG8 710 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 MYO15AQ9UKN7 3530 aa14.7□□□□□ -0.06
USP3-205ENST00000557884 VPS13AQ96RL7 3174 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 TTC34A8MYJ7 566 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 CBX4O00257 560 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 NPC1O15118 1278 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 ARHGAP6O43182 974 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 SYNCRIPO60506 623 aaKnown RBP14.69□□□□□ -0.06
USP3-205ENST00000557884 CD48P09326 243 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 ERCC2P18074 760 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 COMTP21964 271 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 HTR7P34969 479 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 ARL4AP40617 200 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 CCZ1BP86790 482 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 CCZ1P86791 482 aaPredicted RBP14.69□□□□□ -0.06
USP3-205ENST00000557884 SULT2A1Q06520 285 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 MMRN1Q13201 1228 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 ENPP2Q13822 863 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 DPYSQ14117 519 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 POLD3Q15054 466 aaPredicted RBP14.69□□□□□ -0.06
USP3-205ENST00000557884 E2F5Q15329 346 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 IL31Q6EBC2 164 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 LINGO4Q6UY18 593 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 ZNF783Q6ZMS7 281 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 POLNQ7Z5Q5 900 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 KCTD6Q8NC69 237 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 TPCN2Q8NHX9 752 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 ATOH1Q92858 354 aaPredicted RBP14.69□□□□□ -0.06
USP3-205ENST00000557884 MYO19Q96H55 970 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 CELF6Q96J87 481 aaKnown RBP14.69□□□□□ -0.06
USP3-205ENST00000557884 CSPG4P5Q96PW8 444 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 C2orf49Q9BVC5 232 aaPredicted RBP14.69□□□□□ -0.06
USP3-205ENST00000557884 SLC6A17Q9H1V8 727 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 TMEM245Q9H330 911 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 NOL6Q9H6R4 1146 aaKnown RBP14.69□□□□□ -0.06
USP3-205ENST00000557884 POLMQ9NP87 494 aaPredicted RBP14.69□□□□□ -0.06
USP3-205ENST00000557884 BCCIPQ9P287 314 aaKnown RBP eCLIP14.69□□□□□ -0.06
USP3-205ENST00000557884 SLC25A13Q9UJS0 675 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 MFHAS1Q9Y4C4 1052 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 ADGRG1Q9Y653 693 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 R4GN57 208 aa14.69□□□□□ -0.06
USP3-205ENST00000557884 WASH4PA8MWX3 477 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 RASA4BC9J798 803 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 PJA2O43164 708 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 RASA4O43374 803 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 ALDH1A2O94788 518 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 MT-CO1P00395 513 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 PTMAP06454 111 aaKnown RBP14.68□□□□□ -0.06
USP3-205ENST00000557884 SRPRAP08240 638 aaKnown RBP14.68□□□□□ -0.06
USP3-205ENST00000557884 KRT7P08729 469 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 AMPD1P23109 780 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 HADHBP55084 474 aaKnown RBP14.68□□□□□ -0.06
USP3-205ENST00000557884 KIF5AQ12840 1032 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 ZNF528Q3MIS6 628 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 LEKR1Q6ZMV7 388 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 CACUL1Q86Y37 369 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 PGBD3Q8N328 593 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 CAMKK1Q8N5S9 505 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 DCAF4L2Q8NA75 395 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 MDGA1Q8NFP4 955 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 ARHGEF2Q92974 986 aaKnown RBP14.68□□□□□ -0.06
USP3-205ENST00000557884 HMCESQ96FZ2 354 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 CALN1Q9BXU9 219 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 TPSD1Q9BZJ3 242 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 KCNH6Q9H252 994 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 RETREG1Q9H6L5 497 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 CD248Q9HCU0 757 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 ETNK2Q9NVF9 386 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 ALG6Q9Y672 507 aa14.68□□□□□ -0.06
USP3-205ENST00000557884 ATG2BQ96BY7 2078 aa14.67□□□□□ -0.06
USP3-205ENST00000557884 CACNA1HO95180 2353 aa14.67□□□□□ -0.06
USP3-205ENST00000557884 MACROD2A1Z1Q3 448 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms