RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 KCTD4Q8WVF5 259 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 CELF6Q96J87 481 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 PIWIL1Q96J94 861 aaKnown RBP11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 ZNF512Q96ME7 567 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 TRIM8Q9BZR9 551 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 SH3GLB1Q9Y371 365 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 MFHAS1Q9Y4C4 1052 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 VAPBO95292 243 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 CSHL1Q14406 222 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 ATF7IP2Q5U623 682 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 LRRC38Q5VT99 294 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 KLHL35Q6PF15 583 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 CLEC4FQ8N1N0 589 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 DRC3Q9H069 523 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 SOX17Q9H6I2 414 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 LRRC4Q9HBW1 653 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 UBAP1Q9NZ09 502 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 COPG2Q9UBF2 871 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 RIPK3Q9Y572 518 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 TEX264Q9Y6I9 313 aa11.12□□□□□ -0.63
CCDC85C-207ENST00000557769 LINC00854A0A1B0GVQ3 168 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 PTGES3LE9PB15 166 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 CHADO15335 359 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 PMPCBO75439 489 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 SUPT7LO94864 414 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 CCDC130P13994 396 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ACO1P21399 889 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 IL10P22301 178 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 CRHR1P34998 444 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ETV4P43268 484 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 GABRB2P47870 512 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 SULT1E1P49888 294 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 OCA2Q04671 838 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 PTP4A2Q12974 167 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 BOLA3Q53S33 107 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 FBXO48Q5FWF7 155 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 CST9Q5W186 159 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 C12orf56Q8IXR9 622 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 MAGEE2Q8TD90 523 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 CCDC97Q96F63 343 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 DAPK2Q9UIK4 370 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ZNF112Q9UJU3 913 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 PHF24Q9UPV7 400 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 PARP14Q460N5 1801 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 DFFAO00273 331 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 TOR1BO14657 336 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ZBTB14O43829 449 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 LSM8O95777 96 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 LTFP02788 710 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 OATP04181 439 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 GOT1P17174 413 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 PTPN1P18031 435 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 PSME3P61289 254 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 SNRPFP62306 86 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 CNTN2Q02246 1040 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 GNA12Q03113 381 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 BNIP3Q12983 259 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 NOMO1Q15155 1222 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 STILQ15468 1287 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 LSM12Q3MHD2 195 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 EEF1DP3Q658K8 133 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 KIAA2013Q8IYS2 634 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 CDCA5Q96FF9 252 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 WDR83Q9BRX9 315 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 RGSL1A5PLK6 1076 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ANKRD33BA6NCL7 494 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 OGTO15294 1046 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 SRP72O76094 671 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ASS1P00966 412 aaKnown RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 NFICP08651 508 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ABCD1P33897 745 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 GP5P40197 560 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 MTTPP55157 894 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 SLC18A2Q05940 514 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 NR1D2Q14995 579 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ARL13AQ5H913 290 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 NANOGNBQ7Z5D8 188 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 HTR3CQ8WXA8 447 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 TMEM176AQ96HP8 235 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ABHD8Q96I13 439 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 BEGAINQ9BUH8 593 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 GATA5Q9BWX5 397 aaPredicted RBP11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 USP29Q9HBJ7 922 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 POPDC2Q9HBU9 364 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ITGA11Q9UKX5 1188 aa11.11□□□□□ -0.63
CCDC85C-207ENST00000557769 ATP8B3O60423 1300 aa11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 NEMP2A6NFY4 417 aa11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 AP3B1O00203 1094 aa11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 DHX15O43143 795 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 S100BP04271 92 aaPredicted RBP11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 PCNAP12004 261 aa11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 EIF4BP23588 611 aaKnown RBP11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 YWHAHQ04917 246 aaPredicted RBP11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 NSUN2Q08J23 767 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 CTBP1Q13363 440 aa11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 STXBP2Q15833 593 aa11.1□□□□□ -0.63
CCDC85C-207ENST00000557769 C6orf183Q5T699 404 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms