RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 BRMS1LQ5PSV4 323 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 FAM102AQ5T9C2 384 aaPredicted RBP15.05■□□□□ -0
SHMT2-235ENST00000557740 FAM46CQ5VWP2 391 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 DBX2Q6ZNG2 339 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 SLCO6A1Q86UG4 719 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 MSANTD4Q8NCY6 345 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 FEM1AQ9BSK4 669 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 MUC3BQ9H195 1237 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 PIGVQ9NUD9 493 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 BTBD3Q9Y2F9 522 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 FHOD1Q9Y613 1164 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 AKAP13Q12802 2813 aa15.05■□□□□ -0
SHMT2-235ENST00000557740 CABIN1Q9Y6J0 2220 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 GOLGA8CPA6NN73 597 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 C1QTNF3-AMACRE9PGA6 284 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 LSM8O95777 96 aaKnown RBP15.04■□□□□ -0
SHMT2-235ENST00000557740 RHOCP08134 193 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 CYP11B1P15538 503 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 SCNN1AP37088 669 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 VASPP50552 380 aaPredicted RBP15.04■□□□□ -0
SHMT2-235ENST00000557740 DEUP1Q05D60 604 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 SLC45A4Q5BKX6 768 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 KLHDC7AQ5VTJ3 777 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 OTUD1Q5VV17 481 aaPredicted RBP15.04■□□□□ -0
SHMT2-235ENST00000557740 TAF3Q5VWG9 929 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 LRRC31Q6UY01 552 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.04■□□□□ -0
SHMT2-235ENST00000557740 FRS2Q8WU20 508 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 C18orf8Q96DM3 657 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 SERAC1Q96JX3 654 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 NPY6RQ99463 290 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 TKTL2Q9H0I9 626 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 WDCPQ9H6R7 721 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 PKD1L2Q7Z442 2459 aa15.04■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3DA0A087WVF3 549 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3IA0A087WXS9 549 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3EA0A087X179 549 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3KA0A087X1G2 549 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 FAM170AA1A519 330 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3FA6NER0 549 aaPredicted RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 SRRM3A6NNA2 597 aaPredicted RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3LB9A6J9 549 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 ALOX15BO15296 676 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 SLC7A4O43246 635 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TNFSF14O43557 240 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 ATP9BO43861 1147 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 BNIP3LO60238 219 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 RTN2O75298 545 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 ADCY5O95622 1261 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 F9P00740 461 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 ATXN1LP0C7T5 689 aaKnown RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3HP0C7X1 549 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 UCHL3P15374 230 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 ZNF18P17022 549 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TFE3P19532 575 aaPredicted RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 EEF1GP26641 437 aaKnown RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 CD38P28907 300 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 CDH5P33151 784 aaPredicted RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 DRD3P35462 400 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 CXCR3P49682 368 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 PPP2CBP62714 309 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 PPP2CAP67775 309 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 KRT83P78385 493 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 DLG2Q15700 870 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3GQ6DHY5 549 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3CQ6IPX1 549 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 Q6ZVU0 165 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 C14orf80Q86SX3 495 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 ERICH1Q86X53 443 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 XYLT1Q86Y38 959 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D3Q8IZP1 549 aaPredicted RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 OR52K2Q8NGK3 314 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 ALG14Q96F25 216 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TBCBQ99426 244 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 ELF4Q99607 663 aaPredicted RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 C2orf49Q9BVC5 232 aaPredicted RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 EBF2Q9HAK2 575 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 GDF3Q9NR23 364 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TMEM51Q9NW97 253 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 ARHGEF38Q9NXL2 777 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 FTSJ1Q9UET6 329 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 TBC1D30Q9Y2I9 924 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
SHMT2-235ENST00000557740 CFAP47Q6ZTR5 3102 aa15.03■□□□□ -0
SHMT2-235ENST00000557740 A0A1B0GTQ1 180 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 F8VZ95 297 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 GOLGA8SH3BPF8 625 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 PLK4O00444 970 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 YKT6O15498 198 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 CNTN5O94779 1100 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 WNT1P04628 370 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 GABRB2P47870 512 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 METAP1P53582 386 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 SLC25A52Q3SY17 297 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 POM121L1PQ3SYA9 428 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 C5orf22Q49AR2 442 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 CCDC157Q569K6 752 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 TCP11X2Q5H9J9 407 aa15.02■□□□□ -0
SHMT2-235ENST00000557740 ACBD5Q5T8D3 534 aaPredicted RBP15.02■□□□□ -0
SHMT2-235ENST00000557740 NAPEPLDQ6IQ20 393 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms