RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ZNF18P17022 549 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 ITGB6P18564 788 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 CES1P23141 567 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 ACP1P24666 158 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 ACAT1P24752 427 aaKnown RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 ERCC5P28715 1186 aaPredicted RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 PCSK1P29120 753 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 EPHA8P29322 1005 aaPredicted RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 GNA15P30679 374 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 ACSL1P33121 698 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 CCT6AP40227 531 aaKnown RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 ADH7P40394 386 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 PNPLA4P41247 253 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 SYKP43405 635 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 TNNT3P45378 269 aaPredicted RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 LIG4P49917 911 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 BCAT1P54687 386 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 GNG11P61952 73 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 RACK1P63244 317 aaKnown RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 CEBPZQ03701 1054 aaKnown RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 E2F5Q15329 346 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 WHAMMP3Q1A5X7 153 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 ARL13BQ3SXY8 428 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 LINC00303Q3SY05 128 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 PRAMEF14Q5SWL7 426 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 BEND6Q5SZJ8 279 aaPredicted RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 SPECC1LQ69YQ0 1117 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 VSTM1Q6UX27 236 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 C1orf229Q6ZS94 237 aaPredicted RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 TMEM161BQ8NDZ6 487 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 NEK11Q8NG66 645 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 BIRC7Q96CA5 298 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 SLITRK1Q96PX8 696 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 DEPDC7Q96QD5 511 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 SEMA3CQ99985 751 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 BBS2Q9BXC9 721 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 ASB7Q9H672 318 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 ASCL3Q9NQ33 180 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 WDR35Q9P2L0 1181 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 MAGEC2Q9UBF1 373 aaPredicted RBP7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 L1RE1Q9UN81 338 aa7.13□□□□□ -1.27
SPTLC2-206ENST00000557566 PTPRJQ12913 1337 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 ITIH6Q6UXX5 1313 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 ELOA3CA0A087WX78 387 aaPredicted RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 ELOA3DA6NLF2 546 aaPredicted RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 A6NNZ2 444 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 H0YCG3 227 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 EREGO14944 169 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 FANCGO15287 622 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 POLR3GO15318 223 aaPredicted RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 FAM189A1O60320 539 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 TSPAN3O60637 253 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 PPFIA2O75334 1257 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 FSBPO95073 299 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 RBMS1P29558 406 aaKnown RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 LHX1P48742 406 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 COPAP53621 1224 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 CDH8P55286 799 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 NOP14P78316 857 aaKnown RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 TAF10Q12962 218 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 MAPK7Q13164 816 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 CCDC142Q17RM4 750 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 ELOA3BQ3SY89 546 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 TUBB8Q3ZCM7 444 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 TDRD10Q5VZ19 366 aaKnown RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 ICE2Q659A1 982 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 WDR93Q6P2C0 686 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 IGF2-ASQ6U949 168 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 CHSY3Q70JA7 882 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 TC2NQ8N9U0 490 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 ELOA3Q8NG57 546 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 UCMAQ8WVF2 138 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 TNFRSF25Q93038 417 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 CCNL2Q96S94 520 aaPredicted RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 MSTO1Q9BUK6 570 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 TIPINQ9BVW5 301 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 TRIM9Q9C026 710 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 BTBD1Q9H0C5 482 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 LHX5Q9H2C1 402 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 TMEM60Q9H2L4 133 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 GDF3Q9NR23 364 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 GJB4Q9NTQ9 266 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 THAP10Q9P2Z0 257 aaPredicted RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 LRWD1Q9UFC0 647 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 KLF15Q9UIH9 416 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 SALL4Q9UJQ4 1053 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 CPSF3Q9UKF6 684 aaKnown RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 CLIC4Q9Y696 253 aa7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 SETD2Q9BYW2 2564 aaPredicted RBP7.12□□□□□ -1.27
SPTLC2-206ENST00000557566 ZFHX3Q15911 3703 aa7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 COCHO43405 550 aa7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 KIF5CO60282 957 aa7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 CSO75390 466 aaKnown RBP7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 SEC31AO94979 1220 aaKnown RBP7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 CLSTN1O94985 981 aa7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 EPHX1P07099 455 aa7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 OR52Z1P0C646 297 aa7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 FAM87AP0C7U9 286 aa7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 IRF1P10914 325 aa7.11□□□□□ -1.27
SPTLC2-206ENST00000557566 PLS3P13797 630 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms