RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SEMA4BQ9NPR2 832 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 PAPOLBQ9NRJ5 636 aaKnown RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 THAP1Q9NVV9 213 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 KCND3Q9UK17 655 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SYNRGQ9UMZ2 1314 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SH2D7A6NKC9 451 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 DSCR3O14972 297 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 FYB1O15117 783 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 KLK10O43240 276 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 CA12O43570 354 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 TGFB3P10600 412 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 FPR3P25089 353 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 EPHA8P29322 1005 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 EIF2B5Q13144 721 aaKnown RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SLC14A1Q13336 389 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 ALKBH1Q13686 389 aaKnown RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 TTC39AQ5SRH9 613 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SLC9C2Q5TAH2 1124 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SYT13Q7L8C5 426 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 RASAL3Q86YV0 1011 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 TICAM1Q8IUC6 712 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 BRSK2Q8IWQ3 736 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 C11orf65Q8NCR3 313 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 FAM110DQ8TAY7 271 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 HDAC2Q92769 488 aaKnown RBP1.88□□□□□ -2.11
HIF1A-212ENST00000557538 DPF1Q92782 380 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SNAPC3Q92966 411 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 RILPL2Q969X0 211 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 CHFRQ96EP1 664 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 PIMREGQ9BSJ6 248 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 STRA6Q9BX79 667 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 BRD8Q9H0E9 1235 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 KLK15Q9H2R5 256 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SPAG4Q9NPE6 437 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 CDH22Q9UJ99 828 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 SUFUQ9UMX1 484 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 RCE1Q9Y256 329 aa1.88□□□□□ -2.11
HIF1A-212ENST00000557538 KIR2DS5A0A0G2JLQ3 304 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 KIR2DS3K7RE56 304 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CCNT1O60563 726 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 RBMXL2O75526 392 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 PLAUP00749 431 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 PYGLP06737 847 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 EBLN1P0CF75 366 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 FAM200BP0CF97 657 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 PRKCHP24723 683 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 HOXA7P31268 230 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 AKT1P31749 480 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 COPB1P53618 953 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 RAD23BP54727 409 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 INHBEP58166 350 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 BFSP2Q13515 415 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 COLEC12Q5KU26 742 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 MTFR2Q6P444 385 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TMEM65Q6PI78 240 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 PIP4P1Q86T03 277 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TMEM200AQ86VY9 491 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ADGRG3Q86Y34 549 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SETD9Q8NE22 299 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CLEC4CQ8WTT0 213 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 NOC3LQ8WTT2 800 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D22AQ8WUA7 517 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ST8SIA4Q92187 359 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 MLXIPLQ9NP71 852 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 GRHL1Q9NZI5 618 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TRPC5Q9UL62 973 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 PCDHA10Q9Y5I2 948 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TRBV5-7A0A0A0MS05 114 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 E5RJQ4 531 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CCER2I3L3R5 266 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SH3BP5O60239 455 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 HEXAP06865 529 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CD63P08962 238 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CTSAP10619 480 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SLC16A2P36021 539 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SLC12A2P55011 1212 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 PROK1P58294 105 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 RPS13P62277 151 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 KLF10Q13118 480 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 RPS6KA2Q15349 733 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SEC23BQ15437 767 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SPATA1Q5VX52 437 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TBC1D9BQ66K14 1250 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ZNF788Q6ZQV5 615 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TMTC3Q6ZXV5 915 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CHSY1Q86X52 802 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 TMC8Q8IU68 726 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SRRM1Q8IYB3 904 aaKnown RBP1.87□□□□□ -2.11
HIF1A-212ENST00000557538 FAM9BQ8IZU0 186 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ADSSL1Q8N142 457 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 ANKRD44Q8N8A2 993 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SLC16A11Q8NCK7 471 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CEP70Q8NHQ1 597 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CSGALNACT1Q8TDX6 532 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 CREB3L4Q8TEY5 395 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 SKA1Q96BD8 255 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 GPR78Q96P69 363 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 MAP7D2Q96T17 732 aa1.87□□□□□ -2.11
HIF1A-212ENST00000557538 KRTAP9-8Q9BYQ0 159 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms