RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 FUKQ8N0W3 1084 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 SDR16C5Q8N3Y7 309 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 IL22RA1Q8N6P7 574 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 PRR7Q8TB68 274 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 LMX1AQ8TE12 382 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 APOBEC4Q8WW27 367 aaKnown RBP9.75□□□□□ -0.85
NEDD1-211ENST00000557454 PTPRN2Q92932 1015 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 FAM131CQ96AQ9 280 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 TMEM74Q96NL1 305 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 IL12RB2Q99665 862 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 BOCQ9BWV1 1114 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 INTS13Q9NVM9 706 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 KLF15Q9UIH9 416 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 CSNK1G3Q9Y6M4 447 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 SCN8AQ9UQD0 1980 aa9.75□□□□□ -0.85
NEDD1-211ENST00000557454 EDDM13A0A1B0GTR0 161 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 A0A1W2PQM1 296 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 TARSL2A2RTX5 802 aaKnown RBP9.74□□□□□ -0.85
NEDD1-211ENST00000557454 H3BM21 787 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 PFKFB2O60825 505 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 PRPF6O94906 941 aaKnown RBP9.74□□□□□ -0.85
NEDD1-211ENST00000557454 TNNC2P02585 160 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 CSF2P04141 144 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 AKT2P31751 481 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 NOS2P35228 1153 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 CSKP41240 450 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 CTSOP43234 321 aaPredicted RBP9.74□□□□□ -0.85
NEDD1-211ENST00000557454 TNNC1P63316 161 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 CCL7P80098 99 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 CDC20Q12834 499 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 TRIM29Q14134 588 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 SEPT6Q14141 434 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 FZD2Q14332 565 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 IL17AQ16552 155 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 AGBL4Q5VU57 503 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 ASB18Q6ZVZ8 466 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 GLMNQ92990 594 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 CCDC74AQ96AQ1 378 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 CPEB1Q9BZB8 566 aaKnown RBP9.74□□□□□ -0.85
NEDD1-211ENST00000557454 PPM1HQ9ULR3 514 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 PADI4Q9UM07 663 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 CYP46A1Q9Y6A2 500 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 SHANK1Q9Y566 2161 aa9.74□□□□□ -0.85
NEDD1-211ENST00000557454 TPP1O14773 563 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 SLC7A4O43246 635 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 RALAP11233 206 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 ITGB7P26010 798 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 OAS2P29728 719 aaKnown RBP9.73□□□□□ -0.85
NEDD1-211ENST00000557454 ABCD1P33897 745 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 GUCY1B3Q02153 619 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 KCNA1Q09470 495 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 CNTN1Q12860 1018 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 ARID5BQ14865 1188 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 WDR72Q3MJ13 1102 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 ARSIQ5FYB1 569 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 HYIQ5T013 277 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 Q6ZSR6 202 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 ABI3BPQ7Z7G0 1075 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 PARGQ86W56 976 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 SLC2A14Q8TDB8 520 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 GPBAR1Q8TDU6 330 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 PMEPA1Q969W9 287 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 TTC17Q96AE7 1141 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 TMA16Q96EY4 203 aaKnown RBP9.73□□□□□ -0.85
NEDD1-211ENST00000557454 CGRRF1Q99675 332 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 EPAS1Q99814 870 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 SMYD3Q9H7B4 428 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 CSNK1G1Q9HCP0 422 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 INTS6Q9UL03 887 aaKnown RBP9.73□□□□□ -0.85
NEDD1-211ENST00000557454 ENTPD4Q9Y227 616 aa9.73□□□□□ -0.85
NEDD1-211ENST00000557454 A0A1W2PQU0 124 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 A6NNZ2 444 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 TCP11X1B4DZS4 312 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 HHLA1C9JL84 531 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 TBCAO75347 108 aaKnown RBP9.72□□□□□ -0.85
NEDD1-211ENST00000557454 ASLP04424 464 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 NUDT7P0C024 238 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 FAM163BP0C2L3 166 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 VAV1P15498 845 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 JUNDP17535 347 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 HNRNPA2B1P22626 353 aaKnown RBP9.72□□□□□ -0.85
NEDD1-211ENST00000557454 ARSDP51689 593 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 C1orf61Q13536 156 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 ELAVL3Q14576 367 aaKnown RBP9.72□□□□□ -0.85
NEDD1-211ENST00000557454 BMT2Q1RMZ1 405 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 ZNF284Q2VY69 593 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 TMEM119Q4V9L6 283 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 ATP1A1-AS1Q5TC04 95 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 TCTN3Q6NUS6 607 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 RBFAQ8N0V3 343 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 CDK5RAP3Q96JB5 506 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 SLC45A3Q96JT2 553 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 LMLNQ96KR4 655 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 CMKLR1Q99788 373 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 CBWD1Q9BRT8 395 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 GPR27Q9NS67 375 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 MARCH2Q9P0N8 246 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 GGT7Q9UJ14 662 aa9.72□□□□□ -0.85
NEDD1-211ENST00000557454 SARDHQ9UL12 918 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms