RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 OTOP3Q7RTS5 596 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 BNIPLQ7Z465 357 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 HPS6Q86YV9 775 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 ZMIZ2Q8NF64 920 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 LPPQ93052 612 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 MS4A4AQ96JQ5 239 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 PAAF1Q9BRP4 392 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 ABHD16BQ9H3Z7 469 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 RCOR3Q9P2K3 495 aaPredicted RBP18.1■□□□□ 0.49
XRCC3-218ENST00000557439 G3V2L1 256 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 PHGDHO43175 533 aaKnown RBP18.1■□□□□ 0.49
XRCC3-218ENST00000557439 AP1G2O75843 785 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 HOXD8P13378 290 aaPredicted RBP18.1■□□□□ 0.49
XRCC3-218ENST00000557439 COPAP53621 1224 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 CUL3Q13618 768 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 PAN2Q504Q3 1202 aaKnown RBP18.1■□□□□ 0.49
XRCC3-218ENST00000557439 CMPK2Q5EBM0 449 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 LDLRAD1Q5T700 205 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 OLFML2BQ68BL8 750 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 ARHGAP36Q6ZRI8 547 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 SPATA6LQ8N4H0 392 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 SLC2A13Q96QE2 648 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 OR52B2Q96RD2 323 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 CPNE1Q99829 537 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 WDR55Q9H6Y2 383 aaPredicted RBP18.1■□□□□ 0.49
XRCC3-218ENST00000557439 C20orf96Q9NUD7 363 aaPredicted RBP18.1■□□□□ 0.49
XRCC3-218ENST00000557439 NDE1Q9NXR1 346 aa18.1■□□□□ 0.49
XRCC3-218ENST00000557439 F8W8V4 182 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 TK2O00142 265 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 AP2A1O95782 977 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 JCHAINP01591 159 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 C2P06681 752 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 ZNF460Q14592 562 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 MFSD10Q14728 455 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 SPANXN3Q5MJ09 141 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 C6orf163Q5TEZ5 329 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 LPCAT4Q643R3 524 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 LIMS2Q7Z4I7 341 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 DEFB107AQ8IZN7 70 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 C3orf58Q8NDZ4 430 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 SLC26A7Q8TE54 656 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 PCED1BQ96HM7 432 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 LRRC40Q9H9A6 602 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 BFARQ9NZS9 450 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 ANGPTL2Q9UKU9 493 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 SLC39A10Q9ULF5 831 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 TSC2P49815 1807 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 SMIM35A0A1B0GVV1 85 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 HSPA4LO95757 839 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 F2P00734 622 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 FAM200BP0CF97 657 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 KCNE1P15382 129 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 LIMK2P53671 638 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 GRTP1Q5TC63 336 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 FAM219BQ5XKK7 198 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 IRGCQ6NXR0 463 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 SPATA22Q8NHS9 363 aa18.09■□□□□ 0.49
XRCC3-218ENST00000557439 EME2A4GXA9 379 aaPredicted RBP18.08■□□□□ 0.49
XRCC3-218ENST00000557439 MYL3P08590 195 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 WARSP23381 471 aaKnown RBP18.08■□□□□ 0.49
XRCC3-218ENST00000557439 MPSTP25325 297 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 DAOAP59103 153 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 CDK18Q07002 472 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 STXBP5Q5T5C0 1151 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 KCNMB4Q86W47 210 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 PNPLA1Q8N8W4 532 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 URGCPQ8TCY9 931 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 SENP8Q96LD8 212 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 FLRT1Q9NZU1 646 aa18.08■□□□□ 0.49
XRCC3-218ENST00000557439 MBLAC1A4D2B0 266 aaPredicted RBP18.08■□□□□ 0.48
XRCC3-218ENST00000557439 SRGAP2BP0DMP2 458 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 MX2P20592 715 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 ITGAXP20702 1163 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 MSX2P35548 267 aaPredicted RBP18.08■□□□□ 0.48
XRCC3-218ENST00000557439 SERPINB5P36952 375 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 PNPLA4P41247 253 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 GARSP41250 739 aaKnown RBP18.08■□□□□ 0.48
XRCC3-218ENST00000557439 HARS2P49590 506 aaKnown RBP18.08■□□□□ 0.48
XRCC3-218ENST00000557439 AP2B1P63010 937 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 CCNIQ14094 377 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 GRB14Q14449 540 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 PPM1LQ5SGD2 360 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 KDELC2Q7Z4H8 507 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 TMEM135Q86UB9 458 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 APBA2Q99767 749 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 FERMT1Q9BQL6 677 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 MIOSQ9NXC5 875 aa18.08■□□□□ 0.48
XRCC3-218ENST00000557439 STRNO43815 780 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 CYP2B6P20813 491 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 SPRP35270 261 aaPredicted RBP18.07■□□□□ 0.48
XRCC3-218ENST00000557439 SERPINB8P50452 374 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 CLCNKBP51801 687 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 CDC16Q13042 620 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 SEMA3BQ13214 749 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 GRM3Q14832 879 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 FOXB2Q5VYV0 432 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 OR52E8Q6IFG1 317 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 TLK2Q86UE8 772 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 FAM35AQ86V20 835 aa18.07■□□□□ 0.48
XRCC3-218ENST00000557439 CCNJLQ8IV13 435 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms