RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 CD19P15391 556 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 CCT8P50990 548 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 PTK2Q05397 1052 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 CKAP4Q07065 602 aaKnown RBP12.98□□□□□ -0.33
SHMT2-230ENST00000557427 TBC1D25Q3MII6 688 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 NUDT18Q6ZVK8 323 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 ZNF571Q7Z3V5 609 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-230ENST00000557427 DDX42Q86XP3 938 aaKnown RBP eCLIP12.98□□□□□ -0.33
SHMT2-230ENST00000557427 OVCA2Q8WZ82 227 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 NAF1Q96HR8 494 aaKnown RBP12.98□□□□□ -0.33
SHMT2-230ENST00000557427 FAXDC2Q96IV6 333 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 NOX5Q96PH1 765 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 TRIM4Q9C037 500 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 TM9SF3Q9HD45 589 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 IL17BQ9UHF5 180 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 NUDT5Q9UKK9 219 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 INTUQ9ULD6 942 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 PCDHB4Q9Y5E5 795 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 DUSP10Q9Y6W6 482 aa12.98□□□□□ -0.33
SHMT2-230ENST00000557427 DOPEY2Q9Y3R5 2298 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 CYP26A1O43174 497 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 RFPL3O75679 317 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 ZDHHC11BP0C7U3 371 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 IRF1P10914 325 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 ACADVLP49748 655 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 ARID5AQ03989 594 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 DRAP1Q14919 205 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-230ENST00000557427 PRAMEF14Q5SWL7 426 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 SNX30Q5VWJ9 437 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 GJB7Q6PEY0 223 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 GATAD2AQ86YP4 633 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 TMPRSS6Q8IU80 811 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 UBA3Q8TBC4 463 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 NT5C1BQ96P26 610 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHMT2-230ENST00000557427 C6orf106Q9H6K1 298 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-230ENST00000557427 TLR8Q9NR97 1041 aaKnown RBP12.97□□□□□ -0.33
SHMT2-230ENST00000557427 OSER1Q9NX31 292 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 ADAMTS1Q9UHI8 967 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 SCML2Q9UQR0 700 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 CAPN6Q9Y6Q1 641 aa12.97□□□□□ -0.33
SHMT2-230ENST00000557427 A0A1W2PQH9 124 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 FAM92AA1XBS5 289 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 CTAGE15A4D2H0 777 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 NEDD8-MDP1E9PL57 170 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 TLR5O60602 858 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 MOCS3O95396 460 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 CALCAP01258 141 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 CTAGE8P0CG41 777 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 RARGP13631 454 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 TYRP14679 529 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 OXTRP30559 389 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 ACTN2P35609 894 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 CTSKP43235 329 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 COPAP53621 1224 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 YWHAEP62258 255 aaKnown RBP12.96□□□□□ -0.33
SHMT2-230ENST00000557427 ENPP2Q13822 863 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 SHBQ15464 509 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 GOLGA7BQ2TAP0 167 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 SGO2Q562F6 1265 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 TEX35Q5T0J7 233 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 FBXO38Q6PIJ6 1188 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 TMEM270Q6UE05 265 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 CTAGE6Q86UF2 777 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 CTAGE4Q8IX94 777 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 PPM1KQ8N3J5 372 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 ANKRD52Q8NB46 1076 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 SLC30A5Q8TAD4 765 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 SNX19Q92543 992 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 KAT5Q92993 513 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 MED8Q96G25 268 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 LGMNQ99538 433 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 ORAI3Q9BRQ5 295 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 SYT11Q9BT88 431 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 NMUR1Q9HB89 426 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 OSGEPQ9NPF4 335 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-230ENST00000557427 NAGPAQ9UK23 515 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 SNX12Q9UMY4 172 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-230ENST00000557427 SH3BP1Q9Y3L3 701 aa12.96□□□□□ -0.33
SHMT2-230ENST00000557427 A0A1B0GTQ1 180 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 MDM4O15151 490 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 LDOC1O95751 146 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-230ENST00000557427 C1SP09871 688 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
SHMT2-230ENST00000557427 TBXAS1P24557 533 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-230ENST00000557427 ACSL1P33121 698 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 ATP5C1P36542 298 aaKnown RBP12.95□□□□□ -0.34
SHMT2-230ENST00000557427 GRIA4P48058 902 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 SLC8A3P57103 927 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 TMPRSS3P57727 454 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 IFI16Q16666 785 aaKnown RBP12.95□□□□□ -0.34
SHMT2-230ENST00000557427 C10orf120Q5SQS8 335 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 ARHGAP17Q68EM7 881 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 ALKBH5Q6P6C2 394 aaKnown RBP12.95□□□□□ -0.34
SHMT2-230ENST00000557427 TPGS1Q6ZTW0 290 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 PRICKLE2Q7Z3G6 844 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 FAM124AQ86V42 546 aa12.95□□□□□ -0.34
SHMT2-230ENST00000557427 PIGZQ86VD9 579 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms