RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ZNF177Q13360 481 aaPredicted RBP14.58□□□□□ -0.08
SNX6-210ENST00000557341 SUZ12Q15022 739 aaKnown RBP14.58□□□□□ -0.08
SNX6-210ENST00000557341 DPY19L2P1Q6NXN4 242 aa14.58□□□□□ -0.08
SNX6-210ENST00000557341 DSG4Q86SJ6 1040 aa14.58□□□□□ -0.08
SNX6-210ENST00000557341 MSANTD4Q8NCY6 345 aa14.58□□□□□ -0.08
SNX6-210ENST00000557341 SLC6A18Q96N87 628 aa14.58□□□□□ -0.08
SNX6-210ENST00000557341 FAM129BQ96TA1 746 aa14.58□□□□□ -0.08
SNX6-210ENST00000557341 NPY6RQ99463 290 aa14.58□□□□□ -0.08
SNX6-210ENST00000557341 CDC6Q99741 560 aa14.58□□□□□ -0.08
SNX6-210ENST00000557341 PIGVQ9NUD9 493 aa14.58□□□□□ -0.08
SNX6-210ENST00000557341 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNX6-210ENST00000557341 VPS28Q9UK41 221 aa14.58□□□□□ -0.08
SNX6-210ENST00000557341 TPX2Q9ULW0 747 aaKnown RBP14.58□□□□□ -0.08
SNX6-210ENST00000557341 FAM221BA6H8Z2 402 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 VILLO15195 856 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 LSM8O95777 96 aaKnown RBP14.57□□□□□ -0.08
SNX6-210ENST00000557341 UCHL3P15374 230 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 CTSKP43235 329 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 GABRB2P47870 512 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 CCR5P51681 352 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 CDH4P55283 916 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 KCNMA1Q12791 1236 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 INAVAQ3KP66 663 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 C5orf22Q49AR2 442 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 TCP11X2Q5H9J9 407 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 CT47A1Q5JQC4 288 aaPredicted RBP14.57□□□□□ -0.08
SNX6-210ENST00000557341 FAM102AQ5T9C2 384 aaPredicted RBP14.57□□□□□ -0.08
SNX6-210ENST00000557341 KLHDC7AQ5VTJ3 777 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 DBX2Q6ZNG2 339 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 PNPLA1Q8N8W4 532 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 OR52K2Q8NGK3 314 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 OR14C36Q8NHC7 312 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 RHBDD1Q8TEB9 315 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 FRS2Q8WU20 508 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 OR8D1Q8WZ84 308 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 SKA1Q96BD8 255 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 C18orf8Q96DM3 657 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 ALG14Q96F25 216 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 PGAP3Q96FM1 320 aaPredicted RBP14.57□□□□□ -0.08
SNX6-210ENST00000557341 FEM1AQ9BSK4 669 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 TKTL2Q9H0I9 626 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 SIK2Q9H0K1 926 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 WDCPQ9H6R7 721 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 SAMSN1Q9NSI8 373 aaKnown RBP14.57□□□□□ -0.08
SNX6-210ENST00000557341 ARHGEF38Q9NXL2 777 aa14.57□□□□□ -0.08
SNX6-210ENST00000557341 MYLKQ15746 1914 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 NBEAQ8NFP9 2946 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 TDRD6O60522 2096 aaKnown RBP14.56□□□□□ -0.08
SNX6-210ENST00000557341 ITPR1Q14643 2758 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 C1QTNF3-AMACRE9PGA6 284 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 F8VZ95 297 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 H0Y8X5 98 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 ALOX15BO15296 676 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 SLC7A4O43246 635 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 ATP9BO43861 1147 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 PCDHGA12O60330 932 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 DFNA5O60443 496 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 F9P00740 461 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 RHOCP08134 193 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 DRD3P35462 400 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 GRK6P43250 576 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 CXCR3P49682 368 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 RNASE9P60153 205 aaKnown RBP14.56□□□□□ -0.08
SNX6-210ENST00000557341 DEUP1Q05D60 604 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 SLC25A52Q3SY17 297 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 ACCSLQ4AC99 568 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 TAF3Q5VWG9 929 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 ERICH1Q86X53 443 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 XYLT1Q86Y38 959 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 NT5C3BQ969T7 300 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 NAA15Q9BXJ9 866 aaKnown RBP14.56□□□□□ -0.08
SNX6-210ENST00000557341 MUC3BQ9H195 1237 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 AASDHPPTQ9NRN7 309 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 TMEM51Q9NW97 253 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 BTBD3Q9Y2F9 522 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 TBC1D30Q9Y2I9 924 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 OR51B4Q9Y5P0 310 aa14.56□□□□□ -0.08
SNX6-210ENST00000557341 TRPM6Q9BX84 2022 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 C10orf142B7Z368 130 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 ADCY5O95622 1261 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 TFE3P19532 575 aaPredicted RBP14.55□□□□□ -0.08
SNX6-210ENST00000557341 CD38P28907 300 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 NOMO3P69849 1222 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 KRT83P78385 493 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 KCNT1Q5JUK3 1230 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 ACBD5Q5T8D3 534 aaPredicted RBP14.55□□□□□ -0.08
SNX6-210ENST00000557341 FAM46CQ5VWP2 391 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 LRRC31Q6UY01 552 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 Q6ZVU0 165 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 C14orf80Q86SX3 495 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 NOP9Q86U38 636 aaKnown RBP14.55□□□□□ -0.08
SNX6-210ENST00000557341 SH2D3CQ8N5H7 860 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 EPS8L1Q8TE68 723 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 FAM131CQ96AQ9 280 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 TBCBQ99426 244 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 C2orf49Q9BVC5 232 aaPredicted RBP14.55□□□□□ -0.08
SNX6-210ENST00000557341 KDM4CQ9H3R0 1056 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 EBF2Q9HAK2 575 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 ANLNQ9NQW6 1124 aa14.55□□□□□ -0.08
SNX6-210ENST00000557341 TAB2Q9NYJ8 693 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms