RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ZNF224Q9NZL3 707 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 CHURC1-FNTBB4DL54 471 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 FSBPO95073 299 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 RLN1P04808 185 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 H2AFXP16104 143 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 UGT2B15P54855 530 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF276Q8N554 614 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 LRRC20Q8TCA0 184 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 LIMD1Q9UGP4 676 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 FAM170AA1A519 330 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ECHS1P30084 290 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 MAGEA12P43365 314 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF615Q8N8J6 731 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 PDLIM2Q96JY6 352 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 TMEM106CQ9BVX2 250 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 FAIM2Q9BWQ8 316 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 TMEM120AQ9BXJ8 343 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ALDH8A1Q9H2A2 487 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 RABL2AQ9UBK7 228 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 RABL2BQ9UNT1 228 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 TTC37Q6PGP7 1564 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 FAM86C2PA6NEL3 165 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 TADA2AO75478 443 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 FAM153BP0C7A2 387 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 PTX3P26022 381 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 MPP3Q13368 585 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 TRIM40Q6P9F5 258 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 DDX17Q92841 729 aaKnown RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 MAGEE1Q9HCI5 957 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 HMGXB4Q9UGU5 601 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 TMEM44Q2T9K0 475 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 TDRD10Q5VZ19 366 aaKnown RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 METTL3Q86U44 580 aaKnown RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 HERC6Q8IVU3 1022 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 SLITRK4Q8IW52 837 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 SH2D3CQ8N5H7 860 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 SMAD5Q99717 465 aaKnown RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 RUSC1Q9BVN2 902 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 RNPEPL1Q9HAU8 725 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 TSR3Q9UJK0 312 aaKnown RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 UGT2B11O75310 529 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 PVALBP20472 110 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 LCN1P1Q5VSP4 162 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 SULT1C3Q6IMI6 304 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 CLEC17AQ6ZS10 378 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 HM13Q8TCT9 377 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ACTRT1Q8TDG2 376 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 NIF3L1Q9GZT8 377 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ARPC4-TTLL3A0A0A6YYG9 625 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 A0A0A6YYK5 440 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 SCGB2A1O75556 95 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 MLYCDO95822 493 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ZNF177Q13360 481 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 PCSK7Q16549 785 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 LRRC70Q7Z2Q7 622 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 TMEM17Q86X19 198 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 GRAMD1CQ8IYS0 662 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 SLC4A11Q8NBS3 891 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 NEK7Q8TDX7 302 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 RHBDF1Q96CC6 855 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 MGME1Q9BQP7 344 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 PCDH18Q9HCL0 1135 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 CYP17A1P05093 508 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 COILP38432 576 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 BCAMP50895 628 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ARMC8Q8IUR7 673 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 F5H5T6 163 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 HOXA2O43364 376 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 IL6STP40189 918 aaPredicted RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 NOTUMQ6P988 496 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 HEATR1Q9H583 2144 aaKnown RBP8.97□□□□□ -0.97
SYNE3-205ENST00000557275 GCATO75600 419 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 CPA3P15088 417 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 SLC1A6P48664 564 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 MAFIPQ8WZ33 124 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 CITED4Q96RK1 184 aa8.97□□□□□ -0.97
SYNE3-205ENST00000557275 ADGRL3Q9HAR2 1447 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 CAVIN3Q969G5 261 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 APOPT1Q96IL0 206 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 EPB41L1Q9H4G0 881 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 ABCB10Q9NRK6 738 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 CACNA1CQ13936 2221 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 TRDMT1O14717 391 aaKnown RBP8.96□□□□□ -0.97
SYNE3-205ENST00000557275 SLC16A4O15374 487 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 MTA2O94776 668 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 CYP21A2P08686 494 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 ATP4AP20648 1035 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 CDK16Q00536 496 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 ALG10Q5BKT4 473 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 RBM43Q6ZSC3 357 aaKnown RBP8.96□□□□□ -0.97
SYNE3-205ENST00000557275 RASAL3Q86YV0 1011 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 ZDHHC17Q8IUH5 632 aa8.96□□□□□ -0.97
SYNE3-205ENST00000557275 NKX2-3Q8TAU0 364 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms