RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 ACE2Q9BYF1 805 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-230ENST00000557201 MIS12Q9H081 205 aa11.07□□□□□ -0.64
HNRNPC-230ENST00000557201 RBSNQ9H1K0 784 aa11.07□□□□□ -0.64
HNRNPC-230ENST00000557201 SIX2Q9NPC8 291 aa11.07□□□□□ -0.64
HNRNPC-230ENST00000557201 SLCO3A1Q9UIG8 710 aa11.07□□□□□ -0.64
HNRNPC-230ENST00000557201 SIK3Q9Y2K2 1263 aa11.07□□□□□ -0.64
HNRNPC-230ENST00000557201 DAAM1Q9Y4D1 1078 aa11.07□□□□□ -0.64
HNRNPC-230ENST00000557201 PCDHGA1Q9Y5H4 931 aa11.07□□□□□ -0.64
HNRNPC-230ENST00000557201 ACACAQ13085 2346 aa11.07□□□□□ -0.64
HNRNPC-230ENST00000557201 EDDM13A0A1B0GTR0 161 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 A0A1W2PQC6 194 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 LRRC72A6NJI9 287 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 LATO43561 262 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 RNASEH1O60930 286 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 GOT1P17174 413 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 SLC8A1P32418 973 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 ADPRHP54922 357 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 UBASH3AP57075 661 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 C21orf59P57076 290 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 ECT2LQ008S8 904 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 CDH18Q13634 790 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 SYCP1Q15431 976 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 MEA1Q16626 185 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 KLHDC7AQ5VTJ3 777 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 RRAGAQ7L523 313 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 KANSL1Q7Z3B3 1105 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 ADAT2Q7Z6V5 191 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 GATAD2AQ86YP4 633 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 ADAM32Q8TC27 787 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 STK32AQ8WU08 396 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 FRS2Q8WU20 508 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 TSC1Q92574 1164 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 PRMT1Q99873 361 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 UBE2TQ9NPD8 197 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 FTSJ1Q9UET6 329 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 CYTH4Q9UIA0 394 aa11.06□□□□□ -0.64
HNRNPC-230ENST00000557201 URB1O60287 2271 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 TYW5A2RUC4 315 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 FAM47DPA6NHR8 397 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 CBX4O00257 560 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 ENC1O14682 589 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 TEX33O43247 280 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 SART1O43290 800 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 ATMINO43313 823 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 RNASEH2AO75792 299 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 C1SP09871 688 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 UCHL3P15374 230 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 C5AR1P21730 350 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 MZF1P28698 734 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 CD38P28907 300 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 DRD3P35462 400 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 RXRGP48443 463 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 PITX1P78337 314 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 SFSWAPQ12872 951 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 INAVAQ3KP66 663 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 ZC3H12AQ5D1E8 599 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 DENND1BQ6P3S1 775 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 SARM1Q6SZW1 724 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 TMEM110Q86TL2 294 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 LGI2Q8N0V4 545 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 STK40Q8N2I9 435 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 GANCQ8TET4 914 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 RPL10LQ96L21 214 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 OMDQ99983 421 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 NAA15Q9BXJ9 866 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 ARHGAP20Q9P2F6 1191 aa11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 TPX2Q9ULW0 747 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 TP53BP1Q12888 1972 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 NYNRINQ9P2P1 1898 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-230ENST00000557201 KCNU1A8MYU2 1149 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 YKT6O15498 198 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 MOCS2O96007 188 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 ADH1BP00325 375 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 TPM3P06753 285 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 VAV1P15498 845 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 TACR2P21452 398 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 EPHA8P29322 1005 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 PBX1P40424 430 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 ACADSBP45954 432 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 PSMD8P48556 350 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 ACADVLP49748 655 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 STK19P49842 368 aaPredicted RBP11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 PLK1P53350 603 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 METAP1P53582 386 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 CLDN6P56747 220 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 NXPH1P58417 271 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 PPP2CBP62714 309 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 PPP2CAP67775 309 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 APBA1Q02410 837 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 DNAJC3Q13217 504 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 SLC12A1Q13621 1099 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 ELAVL3Q14576 367 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 SFMBT2Q5VUG0 894 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 RAP1GAP2Q684P5 730 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 CXorf57Q6NSI4 855 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 SND1Q7KZF4 910 aaKnown RBP eCLIP11.04□□□□□ -0.644e-6■■□□□ 12.7
HNRNPC-230ENST00000557201 SPATS2Q86XZ4 545 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 SHC3Q92529 594 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 SKA1Q96BD8 255 aa11.04□□□□□ -0.64
HNRNPC-230ENST00000557201 FAM149B1Q96BN6 582 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms