RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TTC7AQ9ULT0 858 aaPredicted RBP4.71□□□□□ -1.66
SRP54-212ENST00000556992 STXBP5LQ9Y2K9 1186 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 DERAQ9Y315 318 aa4.71□□□□□ -1.66
SRP54-212ENST00000556992 C17orf102A2RUQ5 167 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 MBLAC1A4D2B0 266 aaPredicted RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 LACTBL1A8MY62 500 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 CCDC188H7C350 402 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 PGRMC1O00264 195 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 SCDO00767 359 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 B4GALT5O43286 388 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 MED7O43513 233 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 FAM20BO75063 409 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 DUSP11O75319 330 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 CLSTN1O94985 981 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 F2P00734 622 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 VTNP04004 478 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 RPLP2P05387 115 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 GJB1P08034 283 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 MYL3P08590 195 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 PAEPP09466 180 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 IQCF3P0C7M6 154 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 ZNF286BP0CG31 522 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 SMIM10L2AP0DMW4 78 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 SMIM10L2BP0DMW5 78 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 UNGP13051 313 aaPredicted RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 ZSCAN20P17040 1043 aaPredicted RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 CYP2B6P20813 491 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 BMP5P22003 454 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 AXLP30530 894 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 CXCR5P32302 372 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 CYP2C19P33261 490 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 TNFSF9P41273 254 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 SLC1A1P43005 524 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 NSFP46459 744 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 CRYBB1P53674 252 aaPredicted RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 MYL6P60660 151 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 FMO1Q01740 532 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 MYO1EQ12965 1108 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 FSCN1Q16658 493 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 ZNF699Q32M78 642 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 DCAF4L1Q3SXM0 396 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 ZBTB41Q5SVQ8 909 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 LMBRD2Q68DH5 695 aaPredicted RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 TMEM200BQ69YZ2 307 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 CC2D1AQ6P1N0 951 aaPredicted RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 TMEM270Q6UE05 265 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 EP400NLQ6ZTU2 488 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 MAATS1Q7Z4T9 603 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 TLK2Q86UE8 772 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 NT5DC3Q86UY8 548 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 MCOLN2Q8IZK6 566 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 CISD2Q8N5K1 135 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 C7orf31Q8N865 590 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 EIF1ADQ8N9N8 165 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 USP38Q8NB14 1042 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 NOA1Q8NC60 698 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 TMEM35BQ8NCS4 154 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 GPR150Q8NGU9 434 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 CCDC26Q8TAB7 109 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 OLIG1Q8TAK6 271 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 KAT2BQ92831 832 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 FBXW5Q969U6 566 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 BTBD2Q9BX70 525 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 OR10A5Q9H207 317 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 CDT1Q9H211 546 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 CARD9Q9H257 536 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 EPC1Q9H2F5 836 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 PDZD7Q9H5P4 517 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 MINDY3Q9H8M7 445 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 APOBEC3GQ9HC16 384 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 PARVAQ9NVD7 372 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 PARPBPQ9NWS1 579 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 TAS2R14Q9NYV8 317 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 GPRC5BQ9NZH0 403 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 FBXO10Q9UK96 956 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 ABT1Q9ULW3 272 aaKnown RBP4.7□□□□□ -1.66
SRP54-212ENST00000556992 COG5Q9UP83 839 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.7□□□□□ -1.66
SRP54-212ENST00000556992 C2CD2Q9Y426 696 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 PCDHA9Q9Y5H5 950 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 ALG6Q9Y672 507 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 HTTP42858 3142 aa4.7□□□□□ -1.66
SRP54-212ENST00000556992 LAMA3Q16787 3333 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 GOLGA6L10A0A0M3HER8 536 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 CCDC66A2RUB6 948 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 CCDC85CA6NKD9 419 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ZNF561-AS1K7EIQ3 104 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 MYO1FO00160 1098 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 HAS3O00219 553 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 THAP12O43422 761 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 TSPAN1O60635 241 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 GPR32O75388 356 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 ZRANB2O95218 330 aaKnown RBP eCLIP4.69□□□□□ -1.66
SRP54-212ENST00000556992 EDN1P05305 212 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 CALB1P05937 261 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 KRT19P08727 400 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 WEE2P0C1S8 567 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 FAM163BP0C2L3 166 aa4.69□□□□□ -1.66
SRP54-212ENST00000556992 CYP2C9P11712 490 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms