RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SCUBE2Q9NQ36 999 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 DDIT4Q9NX09 232 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 HOOK1Q9UJC3 728 aaKnown RBP15.23■□□□□ 0.03
CHD8-211ENST00000556833 VANGL2Q9ULK5 521 aa15.23■□□□□ 0.03
CHD8-211ENST00000556833 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHD8-211ENST00000556833 KCNU1A8MYU2 1149 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 TLX3O43711 291 aaPredicted RBP15.22■□□□□ 0.03
CHD8-211ENST00000556833 DFNA5O60443 496 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 PRLRP16471 622 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 ZNF18P17022 549 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 HNF1BP35680 557 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 NNMTP40261 264 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 ABCG1P45844 678 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 ARRB1P49407 418 aaPredicted RBP15.22■□□□□ 0.03
CHD8-211ENST00000556833 YWHAZP63104 245 aaKnown RBP15.22■□□□□ 0.03
CHD8-211ENST00000556833 CNTN1Q12860 1018 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 PDCLQ13371 301 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 ELAVL3Q14576 367 aaKnown RBP15.22■□□□□ 0.03
CHD8-211ENST00000556833 ARID5BQ14865 1188 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 CXorf57Q6NSI4 855 aaKnown RBP15.22■□□□□ 0.03
CHD8-211ENST00000556833 TMPRSS12Q86WS5 348 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 TRIM59Q8IWR1 403 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 FRS2Q8WU20 508 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 ZNF606Q8WXB4 792 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 NXPE2Q96DL1 559 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 PRMT1Q99873 361 aaKnown RBP15.22■□□□□ 0.03
CHD8-211ENST00000556833 SRRTQ9BXP5 876 aaKnown RBP15.22■□□□□ 0.03
CHD8-211ENST00000556833 FZD3Q9NPG1 666 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 DKK4Q9UBT3 224 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 SNX10Q9Y5X0 201 aa15.22■□□□□ 0.03
CHD8-211ENST00000556833 PMM2O15305 246 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 P4HA2O15460 535 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 MED7O43513 233 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 IGLV3-25P01717 112 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 RPL34P49207 117 aaKnown RBP15.21■□□□□ 0.03
CHD8-211ENST00000556833 SLC45A4Q5BKX6 768 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 RABGAP1LQ5R372 815 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 C6orf118Q5T5N4 469 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 NAPEPLDQ6IQ20 393 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 FBXL22Q6P050 247 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 C14orf80Q86SX3 495 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 PRPF39Q86UA1 669 aaKnown RBP15.21■□□□□ 0.03
CHD8-211ENST00000556833 KDM1BQ8NB78 822 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 OR8D1Q8WZ84 308 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 SPAG5Q96R06 1193 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 CPXM1Q96SM3 734 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 SIK2Q9H0K1 926 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 THAP9Q9H5L6 903 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 PLCB1Q9NQ66 1216 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 SLC12A6Q9UHW9 1150 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 SLC25A13Q9UJS0 675 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 VPS28Q9UK41 221 aa15.21■□□□□ 0.03
CHD8-211ENST00000556833 A0A1B0GVM2 712 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 BICDL2A1A5D9 508 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 TCAF2A6NFQ2 919 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 BECN2A8MW95 431 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 SLC31A1O15431 190 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 FFAR2O15552 330 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 PNMA6AP0CW24 399 aaPredicted RBP15.2■□□□□ 0.02
CHD8-211ENST00000556833 MYF5P13349 255 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 EIF2S3P41091 472 aaKnown RBP15.2■□□□□ 0.02
CHD8-211ENST00000556833 CDK17Q00537 523 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 PAK1Q13153 545 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 AUHQ13825 339 aaKnown RBP15.2■□□□□ 0.02
CHD8-211ENST00000556833 DLG2Q15700 870 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 AGBL4Q5VU57 503 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 OR6B2Q6IFH4 312 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 FAM183BPQ6ZVS7 135 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 C1orf131Q8NDD1 294 aaKnown RBP15.2■□□□□ 0.02
CHD8-211ENST00000556833 MED15Q96RN5 788 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 TRIM62Q9BVG3 475 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 MUC3BQ9H195 1237 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 ARHGAP20Q9P2F6 1191 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 AJAP1Q9UKB5 411 aaPredicted RBP15.2■□□□□ 0.02
CHD8-211ENST00000556833 CNTN6Q9UQ52 1028 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 RAI2Q9Y5P3 530 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 PTPRQQ9UMZ3 2332 aa15.2■□□□□ 0.02
CHD8-211ENST00000556833 A0A087WV48 116 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 K7ERQ8 282 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 RNF103O00237 685 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 LATO43561 262 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 PLRG1O43660 514 aaKnown RBP15.19■□□□□ 0.02
CHD8-211ENST00000556833 SNAP91O60641 907 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 GADD45BO75293 160 aaPredicted RBP15.19■□□□□ 0.02
CHD8-211ENST00000556833 ENDOD1O94919 500 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 ERBB2P04626 1255 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 TFE3P19532 575 aaPredicted RBP15.19■□□□□ 0.02
CHD8-211ENST00000556833 SLC9A1P19634 815 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 CCR1P32246 355 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 MORC3Q14149 939 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 KDM7AQ6ZMT4 941 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 TMEM110Q86TL2 294 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 WDTC1Q8N5D0 677 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 TMPRSS4Q9NRS4 437 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHD8-211ENST00000556833 PCDHGA1Q9Y5H4 931 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 HS3ST4Q9Y661 456 aa15.19■□□□□ 0.02
CHD8-211ENST00000556833 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.18■□□□□ 0.02
CHD8-211ENST00000556833 C10orf142B7Z368 130 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms