RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 ELF2Q15723 593 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 HNRNPA1L2Q32P51 320 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 RAB6CQ53S08 254 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 BOLA3Q53S33 107 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 ARTNQ5T4W7 220 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 ERMARDQ5T6L9 678 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 KIAA1211LQ6NV74 962 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 RWDD4Q6NW29 188 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 SLC36A4Q6YBV0 504 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 PRR23BQ6ZRT6 265 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 TFAP2DQ7Z6R9 452 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 DNAAF5Q86Y56 855 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 CCDC170Q8IYT3 715 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 APCDD1Q8J025 514 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 OR2T3Q8NH03 318 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 ZNF564Q8TBZ8 553 aaPredicted RBP10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 ZC3H10Q96K80 434 aaKnown RBP10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 MRGPRX3Q96LB0 322 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 MRGPRX1Q96LB2 322 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 PHOX2BQ99453 314 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 TRIM7Q9C029 511 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 RAB6CQ9H0N0 254 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 PRDM16Q9HAZ2 1276 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 IMPACTQ9P2X3 320 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 ZNF212Q9UDV6 495 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 GMEB2Q9UKD1 530 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 AP4E1Q9UPM8 1137 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 SNX10Q9Y5X0 201 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 RAD54BQ9Y620 910 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 SPAG17Q6Q759 2223 aa10.84□□□□□ -0.67
MTHFD1-214ENST00000556771 EML5Q05BV3 1969 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 EDDM13A0A1B0GTR0 161 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 WASH4PA8MWX3 477 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 GOLGA6L6A8MZA4 724 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 FAM72CH0Y354 149 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 RNASEH1O60930 286 aaKnown RBP10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 RHOBTB1O94844 696 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 FECHP22830 423 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 EPHB2P29323 1055 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 CYLC1P35663 651 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 GEMIN4P57678 1058 aaKnown RBP10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 GNA12Q03113 381 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 SLC20A2Q08357 652 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 SFSWAPQ12872 951 aaKnown RBP10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 SEMA3BQ13214 749 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 HADHQ16836 314 aaKnown RBP10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 SPDYCQ5MJ68 293 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 FAM72AQ5TYM5 149 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 FAM72DQ6L9T8 149 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 NLRP14Q86W24 1093 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 FAM72BQ86X60 149 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 TMPRSS6Q8IU80 811 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 RHOT2Q8IXI1 618 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 RTL3Q8N8U3 475 aaKnown RBP10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 OR52K2Q8NGK3 314 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 TEKT4Q8WW24 435 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 RUBCNQ92622 972 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 PRCCQ92733 491 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 SIPA1Q96FS4 1042 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 MYO19Q96H55 970 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 SNRNP25Q9BV90 132 aaKnown RBP10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 TPSD1Q9BZJ3 242 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 MAGEH1Q9H213 219 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 CTTNBP2NLQ9P2B4 639 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 USP18Q9UMW8 372 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 SCML1Q9UN30 329 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 NEU3Q9UQ49 428 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 HS3ST2Q9Y278 367 aa10.83□□□□□ -0.68
MTHFD1-214ENST00000556771 ZSCAN5CA6NGD5 496 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 ATP9BO43861 1147 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 CREB3O43889 395 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 RAMP2O60895 175 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 LRP3O75074 770 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 MTA2O94776 668 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 PROSCO94903 275 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 LCA5LO95447 670 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 IGLV3-19P01714 112 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 RETP07949 1114 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 ACADMP11310 421 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 HLA-EP13747 358 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 OXTRP30559 389 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 MAN1A1P33908 653 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 DPP6P42658 865 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 CTSOP43234 321 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 HCAR3P49019 387 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 COPAP53621 1224 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 YBEYP58557 167 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 TPI1P60174 286 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 SRSF5Q13243 272 aaKnown RBP10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 ELAVL3Q14576 367 aaKnown RBP10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 TCEAL1Q15170 157 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 TTC31Q49AM3 519 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 ZNF776Q68DI1 518 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 RETSATQ6NUM9 610 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 KIAA1324Q6UXG2 1013 aaKnown RBP10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 ASCL5Q7RTU5 278 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 DSG4Q86SJ6 1040 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 TMTC1Q8IUR5 882 aa10.82□□□□□ -0.68
MTHFD1-214ENST00000556771 ARFGAP1Q8N6T3 406 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms