RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 KCNJ12Q14500 433 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 DRAP1Q14919 205 aaPredicted RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 TAF5Q15542 800 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 TEAD4Q15561 434 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 PITRM1Q5JRX3 1037 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 FAM183BPQ6ZVS7 135 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 SLC26A9Q7LBE3 791 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 ZDHHC17Q8IUH5 632 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 DHX40Q8IX18 779 aaKnown RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 ZCCHC9Q8N567 271 aaKnown RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 WDTC1Q8N5D0 677 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 GPT2Q8TD30 523 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 DNASE2BQ8WZ79 361 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 TTC17Q96AE7 1141 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 SGK2Q9HBY8 427 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 SIX2Q9NPC8 291 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 PRSS16Q9NQE7 514 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 DNAAF2Q9NVR5 837 aaKnown RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 TMEM51Q9NW97 253 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 RRN3Q9NYV6 651 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 EIF2B4Q9UI10 523 aaKnown RBP7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 STAP1Q9ULZ2 295 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 ERVW-1Q9UQF0 538 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 PAXBP1Q9Y5B6 917 aa7.94□□□□□ -1.14
HNRNPC-226ENST00000556628 PCDH15Q96QU1 1955 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 DCHS1Q96JQ0 3298 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 EDDM13A0A1B0GTR0 161 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 TTLL8A6PVC2 850 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 M0QYT0 321 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 BCAT2O15382 392 aaPredicted RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SIN3BO75182 1162 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 FSBPO95073 299 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SEMA4FO95754 770 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 CER1O95813 267 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 ERBB2P04626 1255 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 PNMA6AP0CW24 399 aaPredicted RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 ACSL1P33121 698 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 MATKP42679 507 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SULT1E1P49888 294 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 RNASE9P60153 205 aaKnown RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 PITX1P78337 314 aaPredicted RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SIM1P81133 766 aaPredicted RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SHC2P98077 582 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 DEUP1Q05D60 604 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 GRIK2Q13002 908 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 ST3GAL2Q16842 350 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 HNRNPA1L2Q32P51 320 aaKnown RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 PTPN20Q4JDL3 420 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 TCP11X2Q5H9J9 407 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 FSCBQ5H9T9 825 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 MIIPQ5JXC2 388 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 BRMS1LQ5PSV4 323 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 FKBP15Q5T1M5 1219 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 CAVIN1Q6NZI2 390 aaKnown RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SASS6Q6UVJ0 657 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 IL27RAQ6UWB1 636 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 OLFML1Q6UWY5 402 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 MMS22LQ6ZRQ5 1243 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 ADAT2Q7Z6V5 191 aaKnown RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 PIP4P1Q86T03 277 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SLC47A2Q86VL8 602 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 ERICH1Q86X53 443 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 FAM71AQ8IYT1 594 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 CCDC116Q8IYX3 515 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 CCAR2Q8N163 923 aaKnown RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 DEPDC4Q8N2C3 294 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 TMEM151AQ8N4L1 468 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 ANKRD20A12PQ8NF67 263 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 ZNF397Q8NF99 534 aaPredicted RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SKA1Q96BD8 255 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 C18orf8Q96DM3 657 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 MYEOVQ96EZ4 313 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 RPRD1AQ96P16 312 aaPredicted RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SLC2A13Q96QE2 648 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 OMDQ99983 421 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SIK2Q9H0K1 926 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 WDCPQ9H6R7 721 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 PLCB1Q9NQ66 1216 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SAMSN1Q9NSI8 373 aaKnown RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 XPO7Q9UIA9 1087 aaKnown RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 SLC25A13Q9UJS0 675 aa7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 AJAP1Q9UKB5 411 aaPredicted RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 INTS6Q9UL03 887 aaKnown RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 NYNRINQ9P2P1 1898 aaKnown RBP7.93□□□□□ -1.14
HNRNPC-226ENST00000556628 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 GOLGA6L3A6NEY3 463 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 FAM47DPA6NHR8 397 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 LRRC72A6NJI9 287 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 TTC34A8MYJ7 566 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 ESPNB1AK53 854 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 CLDN11O75508 207 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 RNASEH2AO75792 299 aaKnown RBP7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 TRIM16O95361 564 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 F9P00740 461 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 UCHL3P15374 230 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 CYP11B1P15538 503 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 PDGFRAP16234 1089 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 SLC8A1P32418 973 aa7.92□□□□□ -1.14
HNRNPC-226ENST00000556628 AFF3P51826 1226 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms