RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 MIS12Q9H081 205 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 NAALADL1Q9UQQ1 740 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 PCDHB4Q9Y5E5 795 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 ATP6V1DQ9Y5K8 247 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 TENM4Q6N022 2769 aa12.26□□□□□ -0.45
ACTN1-221ENST00000556571 VAV1P15498 845 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 TACR2P21452 398 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-221ENST00000556571 PLK1P53350 603 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 METAP1P53582 386 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 OXCT1P55809 520 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 TMPRSS3P57727 454 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 FKBP3Q00688 224 aaKnown RBP12.25□□□□□ -0.45
ACTN1-221ENST00000556571 PKP1Q13835 747 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 RAP1GAP2Q684P5 730 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 BEND5Q7L4P6 421 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 CHSY1Q86X52 802 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 OR4C6Q8NH72 309 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 FRS2Q8WU20 508 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 FAM149B1Q96BN6 582 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 HIC2Q96JB3 615 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 BTN2A3PQ96KV6 586 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 SPATA32Q96LK8 384 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 PPP1R9BQ96SB3 815 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 TSG101Q99816 390 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 ZSWIM1Q9BR11 485 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 KLHL11Q9NVR0 708 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 XPO7Q9UIA9 1087 aaKnown RBP12.25□□□□□ -0.45
ACTN1-221ENST00000556571 SARDHQ9UL12 918 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 PPM1HQ9ULR3 514 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 PCDHB1Q9Y5F3 818 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 MYLKQ15746 1914 aa12.25□□□□□ -0.45
ACTN1-221ENST00000556571 C1QTNF3-AMACRE9PGA6 284 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 F5H5T6 163 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 RNF225M0QZC1 329 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-221ENST00000556571 ALOX15BO15296 676 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 OPA1O60313 960 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 DXOO77932 396 aaKnown RBP12.24□□□□□ -0.45
ACTN1-221ENST00000556571 MPOP05164 745 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 CKMT1AP12532 417 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 PDGFRAP16234 1089 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 DGKAP23743 735 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 BRD2P25440 801 aaKnown RBP12.24□□□□□ -0.45
ACTN1-221ENST00000556571 LSSP48449 732 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 RPL34P49207 117 aaKnown RBP12.24□□□□□ -0.45
ACTN1-221ENST00000556571 ERVPABLB-1P60509 514 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 KCNMA1Q12791 1236 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 CNTN1Q12860 1018 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 ZC3H12AQ5D1E8 599 aaKnown RBP12.24□□□□□ -0.45
ACTN1-221ENST00000556571 AGBL4Q5VU57 503 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 CDCP2Q5VXM1 449 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 TAC4Q86UU9 113 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 MYO18BQ8IUG5 2567 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 SMYD4Q8IYR2 804 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-221ENST00000556571 CCAR2Q8N163 923 aaKnown RBP12.24□□□□□ -0.45
ACTN1-221ENST00000556571 SLC35C1Q96A29 364 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 NAF1Q96HR8 494 aaKnown RBP12.24□□□□□ -0.45
ACTN1-221ENST00000556571 NT5C1BQ96P26 610 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 DEPDC7Q96QD5 511 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 PREBQ9HCU5 417 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 ARMCX3Q9UH62 379 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-221ENST00000556571 SLC12A6Q9UHW9 1150 aa12.24□□□□□ -0.45
ACTN1-221ENST00000556571 TP53BP1Q12888 1972 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ATMQ13315 3056 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 MCF2LO15068 1137 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ATP9BO43861 1147 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 USP12O75317 370 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 GP1BAP07359 652 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 THEGLP0DJG4 465 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ALPPL2P10696 532 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ZNF18P17022 549 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ACADSBP45954 432 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 GABREP78334 506 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 CCDC15Q0P6D6 951 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ACCSLQ4AC99 568 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 RABGAP1LQ5R372 815 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ARHGAP40Q5TG30 622 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 TTC39BQ5VTQ0 682 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-221ENST00000556571 SYPL2Q5VXT5 272 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 NEK5Q6P3R8 708 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 TMC6Q7Z403 805 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 PPM1KQ8N3J5 372 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ATP6V0D2Q8N8Y2 350 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 TMEM145Q8NBT3 493 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ERCC4Q92889 916 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-221ENST00000556571 DPH1Q9BZG8 443 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 POLR1BQ9H9Y6 1135 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 ST7Q9NRC1 585 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 EVA1BQ9NVM1 165 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.23□□□□□ -0.45
ACTN1-221ENST00000556571 UCKL1Q9NWZ5 548 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 SLC25A13Q9UJS0 675 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 CA5BQ9Y2D0 317 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 HECTD1Q9ULT8 2610 aa12.23□□□□□ -0.45
ACTN1-221ENST00000556571 A0A1B0GVM2 712 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 TCAF2A6NFQ2 919 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 NEMP2A6NFY4 417 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 KCNU1A8MYU2 1149 aa12.22□□□□□ -0.45
ACTN1-221ENST00000556571 PMM2O15305 246 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms