RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CYP11B1P15538 503 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 VASPP50552 380 aaPredicted RBP23.24■■□□□ 1.31
ACTN1-220ENST00000556433 ADPRHP54922 357 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 KLHDC7AQ5VTJ3 777 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 OTUD1Q5VV17 481 aaPredicted RBP23.24■■□□□ 1.31
ACTN1-220ENST00000556433 OR8D1Q8WZ84 308 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 C18orf8Q96DM3 657 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 TKTL2Q9H0I9 626 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 NUP62CLQ9H1M0 184 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 AASDHPPTQ9NRN7 309 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 SAMSN1Q9NSI8 373 aaKnown RBP23.24■■□□□ 1.31
ACTN1-220ENST00000556433 PIGVQ9NUD9 493 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 VPS28Q9UK41 221 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 STAP1Q9ULZ2 295 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 OR51B4Q9Y5P0 310 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 FHOD1Q9Y613 1164 aa23.24■■□□□ 1.31
ACTN1-220ENST00000556433 ZFHX4Q86UP3 3567 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3DA0A087WVF3 549 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3IA0A087WXS9 549 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3EA0A087X179 549 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3KA0A087X1G2 549 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3FA6NER0 549 aaPredicted RBP23.23■■□□□ 1.31
ACTN1-220ENST00000556433 GOLGA8CPA6NN73 597 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3LB9A6J9 549 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 ATP9BO43861 1147 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 PCDHGA12O60330 932 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 DFNA5O60443 496 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3HP0C7X1 549 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TFE3P19532 575 aaPredicted RBP23.23■■□□□ 1.31
ACTN1-220ENST00000556433 CDH5P33151 784 aaPredicted RBP23.23■■□□□ 1.31
ACTN1-220ENST00000556433 GRK6P43250 576 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 CXCR3P49682 368 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 SULT1E1P49888 294 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 CDH4P55283 916 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 IL9RQ01113 521 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 DLG2Q15700 870 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 C5orf22Q49AR2 442 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 BRMS1LQ5PSV4 323 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 PRAMEF14Q5SWL7 426 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TAF3Q5VWG9 929 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3GQ6DHY5 549 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3CQ6IPX1 549 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 CCNI2Q6ZMN8 369 aaPredicted RBP23.23■■□□□ 1.31
ACTN1-220ENST00000556433 DSG4Q86SJ6 1040 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 ERICH1Q86X53 443 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D3Q8IZP1 549 aaPredicted RBP23.23■■□□□ 1.31
ACTN1-220ENST00000556433 ARHGEF38Q9NXL2 777 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 TBC1D30Q9Y2I9 924 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 AKAP13Q12802 2813 aa23.23■■□□□ 1.31
ACTN1-220ENST00000556433 FAM170AA1A519 330 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 C10orf142B7Z368 130 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 PLK4O00444 970 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 WNT9AO14904 365 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 CNTN5O94779 1100 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 F9P00740 461 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 WNT1P04628 370 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 DRD3P35462 400 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 FAM46CQ5VWP2 391 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 MUC3BQ9H195 1237 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 ANLNQ9NQW6 1124 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 TOR4AQ9NXH8 423 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 TPX2Q9ULW0 747 aaKnown RBP23.22■■□□□ 1.31
ACTN1-220ENST00000556433 SNX10Q9Y5X0 201 aa23.22■■□□□ 1.31
ACTN1-220ENST00000556433 A0A1B0GTQ1 180 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 ZNF18P17022 549 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 CD38P28907 300 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 GABRB2P47870 512 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 METAP1P53582 386 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 DEUP1Q05D60 604 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 SCAPQ12770 1279 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 FAM102AQ5T9C2 384 aaPredicted RBP23.21■■□□□ 1.31
ACTN1-220ENST00000556433 NT5C3BQ969T7 300 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 SERAC1Q96JX3 654 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 TBCBQ99426 244 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 ELF4Q99607 663 aaPredicted RBP23.21■■□□□ 1.31
ACTN1-220ENST00000556433 NAA15Q9BXJ9 866 aaKnown RBP23.21■■□□□ 1.31
ACTN1-220ENST00000556433 RALYQ9UKM9 306 aaKnown RBP23.21■■□□□ 1.31
ACTN1-220ENST00000556433 SARDHQ9UL12 918 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 PPM1HQ9ULR3 514 aa23.21■■□□□ 1.31
ACTN1-220ENST00000556433 A0A1W2PR77 199 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 I6L893 689 aaPredicted RBP23.2■■□□□ 1.3
ACTN1-220ENST00000556433 TNFSF14O43557 240 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 BNIP3LO60238 219 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 RTN2O75298 545 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 RHOCP08134 193 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 UCHL3P15374 230 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 SCNN1AP37088 669 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 SLC25A52Q3SY17 297 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 ALFQ53S48 1182 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 TCP11X2Q5H9J9 407 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 CT47A1Q5JQC4 288 aaPredicted RBP23.2■■□□□ 1.3
ACTN1-220ENST00000556433 LRRC31Q6UY01 552 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 XYLT1Q86Y38 959 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 SH2D3CQ8N5H7 860 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 PGAP3Q96FM1 320 aaPredicted RBP23.2■■□□□ 1.3
ACTN1-220ENST00000556433 STK33Q9BYT3 514 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 PAXBP1Q9Y5B6 917 aa23.2■■□□□ 1.3
ACTN1-220ENST00000556433 DRGXA6NNA5 263 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 C1QTNF3-AMACRE9PGA6 284 aa23.19■■□□□ 1.3
ACTN1-220ENST00000556433 MCF2LO15068 1137 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms