RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FEM1AQ9BSK4 669 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 NUP85Q9BW27 656 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 TMEM245Q9H330 911 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 SPTLC3Q9NUV7 552 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 MPP6Q9NZW5 540 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 FZD10Q9ULW2 581 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 R4GN57 208 aa9.93□□□□□ -0.82
SRP54-210ENST00000556380 SDK1Q7Z5N4 2213 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.92□□□□□ -0.82
SRP54-210ENST00000556380 SRGAP2O75044 1071 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 LRIG2O94898 1065 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 LCA5LO95447 670 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 H2AFZP0C0S5 128 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 TMEM253P0C7T8 217 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 RHOQP17081 205 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 POLR2EP19388 210 aaKnown RBP9.92□□□□□ -0.82
SRP54-210ENST00000556380 PRKCHP24723 683 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 MIPP30301 263 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 CDC25BP30305 580 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 PCK1P35558 622 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 CTSOP43234 321 aaPredicted RBP9.92□□□□□ -0.82
SRP54-210ENST00000556380 AIF1P55008 147 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 OXCT1P55809 520 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 ZNF177Q13360 481 aaPredicted RBP9.92□□□□□ -0.82
SRP54-210ENST00000556380 ACAP1Q15027 740 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 TCEAL1Q15170 157 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 CA9Q16790 459 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 HEATR6Q6AI08 1181 aaKnown RBP9.92□□□□□ -0.82
SRP54-210ENST00000556380 SCYL2Q6P3W7 929 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 H2AFVQ71UI9 128 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 SETD3Q86TU7 594 aaPredicted RBP9.92□□□□□ -0.82
SRP54-210ENST00000556380 CHPFQ8IZ52 775 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 PYROXD2Q8N2H3 581 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 KDM1BQ8NB78 822 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 TSTD1Q8NFU3 115 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 CYB5D2Q8WUJ1 264 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 BTBD6Q96KE9 485 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 CIPCQ9C0C6 399 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 ZYG11BQ9C0D3 744 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 RETREG1Q9H6L5 497 aa9.92□□□□□ -0.82
SRP54-210ENST00000556380 FANCMQ8IYD8 2048 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 A0A0D9SEW6 157 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 ILVBLA1L0T0 632 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 AXIN1O15169 862 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 RNF8O76064 485 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 MTA2O94776 668 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 ASLP04424 464 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 ATP5BP06576 529 aaKnown RBP9.91□□□□□ -0.82
SRP54-210ENST00000556380 HOXB2P14652 356 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 TCF4P15884 667 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 IL1R2P27930 398 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 CAMK2GQ13555 558 aaPredicted RBP9.91□□□□□ -0.82
SRP54-210ENST00000556380 PIGHQ14442 188 aaPredicted RBP9.91□□□□□ -0.82
SRP54-210ENST00000556380 E2F5Q15329 346 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 ERMARDQ5T6L9 678 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 DAB2IPQ5VWQ8 1189 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 RNF219Q5W0B1 726 aaPredicted RBP9.91□□□□□ -0.82
SRP54-210ENST00000556380 SDE2Q6IQ49 451 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 ZNF783Q6ZMS7 281 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 CPNE8Q86YQ8 564 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 TMEM139Q8IV31 216 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 PSTKQ8IV42 348 aaKnown RBP9.91□□□□□ -0.82
SRP54-210ENST00000556380 CCDC170Q8IYT3 715 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 MDGA1Q8NFP4 955 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 ATRIPQ8WXE1 791 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 PSMB7Q99436 277 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 NCAPGQ9BPX3 1015 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 SEMA4AQ9H3S1 761 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 DEF6Q9H4E7 631 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 NDFIP2Q9NV92 336 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 TMEM248Q9NWD8 314 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 IMPACTQ9P2X3 320 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 UVRAGQ9P2Y5 699 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 PCSK1NQ9UHG2 260 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 IP6K2Q9UHH9 426 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 SLCO3A1Q9UIG8 710 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 ANAPC7Q9UJX3 599 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 INTUQ9ULD6 942 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 PLA2G4CQ9UP65 541 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 ERVW-1Q9UQF0 538 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 RAD54BQ9Y620 910 aa9.91□□□□□ -0.82
SRP54-210ENST00000556380 TTC24A2A3L6 582 aaPredicted RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 WASH4PA8MWX3 477 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 MYO1FO00160 1098 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 ZMPSTE24O75844 475 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 ALDH1A2O94788 518 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 PROSCO94903 275 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 AVPP01185 164 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 SRPRAP08240 638 aaKnown RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 HLA-EP13747 358 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 GABRG2P18507 467 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 CNR2P34972 360 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 PLA2G5P39877 138 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 ECT2LQ008S8 904 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 SLC25A11Q02978 314 aaKnown RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 SRSF5Q13243 272 aaKnown RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 MAP7D1Q3KQU3 841 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 BOLA3Q53S33 107 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 EFHC2Q5JST6 749 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 C6orf118Q5T5N4 469 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms