RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 MCM7P33993 719 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 EIF2DP41214 584 aaKnown RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 MATR3P43243 847 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 ABCG1P45844 678 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 SLC6A11P48066 632 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PDE6CP51160 858 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 GUCY2FP51841 1108 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 GPR85P60893 370 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 TSPY1Q01534 308 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 ORC2Q13416 577 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PDIA5Q14554 519 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PLEKHG6Q3KR16 790 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 WDR45BQ5MNZ6 344 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 SYCP2LQ5T4T6 812 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 EMC10Q5UCC4 262 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 C9orf57Q5W0N0 161 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 RPTNQ6XPR3 784 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 TRMT11Q7Z4G4 463 aaKnown RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 DAW1Q8N136 415 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 GALNT15Q8N3T1 639 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 DEFB119Q8N690 84 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 ARL14EPQ8N8R7 260 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 TRIML1Q8N9V2 468 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 RCBTB1Q8NDN9 531 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 NUP43Q8NFH3 380 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 OR2I1PQ8NGU4 316 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 SPATA18Q8TC71 538 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 SETD7Q8WTS6 366 aaKnown RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 TRMT2BQ96GJ1 504 aaKnown RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 ZNF419Q96HQ0 510 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PWWP2AQ96N64 755 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 SLC22A12Q96S37 553 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PI4K2AQ9BTU6 479 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 TIPINQ9BVW5 301 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 TM6SF1Q9BZW5 370 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 RPF1Q9H9Y2 349 aaKnown RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 TRPC7Q9HCX4 862 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 PDRG1Q9NUG6 133 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 GCNT4Q9P109 453 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 IMPACTQ9P2X3 320 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 ORC3Q9UBD5 711 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 ARHGAP26Q9UNA1 814 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 DERAQ9Y315 318 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 ATXN2Q99700 1313 aaKnown RBP5.16□□□□□ -1.58
ATXN3-239ENST00000556315 ASXL3Q9C0F0 2248 aa5.16□□□□□ -1.58
ATXN3-239ENST00000556315 TDRD15B5MCY1 1934 aaKnown RBP5.15□□□□□ -1.58
ATXN3-239ENST00000556315 A0A1W2PQJ5 194 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 ANO9A1A5B4 782 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 ZC3H12DA2A288 527 aaKnown RBP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 TBC1D3BA6NDS4 549 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 ANTXRLA6NF34 631 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 NUDT19A8MXV4 375 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 H0YCG3 227 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 J3QKU1 62 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 PPEF2O14830 753 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 EPB41L2O43491 1005 aaKnown RBP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 NDUFS2O75306 463 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 TADA3O75528 432 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 RFPL3O75679 317 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 C1QL1O75973 258 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 REC8O95072 547 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 CTDNEP1O95476 244 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 OR52Z1P0C646 297 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 ZNF883P0CG24 379 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 FDPSP14324 419 aaKnown RBP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 MAPKAPK2P49137 400 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 GPR15P49685 360 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 TAF6P49848 677 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 MVKQ03426 396 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 LSAMPQ13449 338 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 KCNB1Q14721 858 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 NR1I3Q14994 352 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 DHCR24Q15392 516 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 ZNF174Q15697 407 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 PREPLQ4J6C6 727 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 ZC2HC1CQ53FD0 456 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 SDHAF4Q5VUM1 108 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 WSCD1Q658N2 575 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 MBLAC2Q68D91 279 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 RINT1Q6NUQ1 792 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 RHBDF2Q6PJF5 856 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 IL27RAQ6UWB1 636 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 C1orf186Q6ZWK4 172 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 SLC41A1Q8IVJ1 513 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 DIS3L2Q8IYB7 885 aaKnown RBP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 ZNF843Q8N446 348 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 SYT8Q8NBV8 401 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 TMEM161BQ8NDZ6 487 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 ACBD6Q9BR61 282 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 PYM1Q9BRP8 204 aaKnown RBP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 CCSER1Q9C0I3 900 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 HAPLN2Q9GZV7 340 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 PRORYQ9H606 182 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 ASB7Q9H672 318 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 DDX19AQ9NUU7 478 aaKnown RBP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.15□□□□□ -1.59
ATXN3-239ENST00000556315 LRWD1Q9UFC0 647 aa5.15□□□□□ -1.59
ATXN3-239ENST00000556315 NDOR1Q9UHB4 597 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms