RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 KCNE4Q8WWG9 221 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 POMGNT1Q8WZA1 660 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 BIRC7Q96CA5 298 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 PLIN2Q99541 437 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 REEP2Q9BRK0 252 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ORAI3Q9BRQ5 295 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ACE2Q9BYF1 805 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-236ENST00000556220 DPH1Q9BZG8 443 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 BTBD1Q9H0C5 482 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 TMEM30AQ9NV96 361 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 IL37Q9NZH6 218 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ADAMTS1Q9UHI8 967 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 SIX4Q9UIU6 781 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 USP9YO00507 2555 aaPredicted RBP7.21□□□□□ -1.26
ATXN3-236ENST00000556220 ANK1P16157 1881 aa7.21□□□□□ -1.26
ATXN3-236ENST00000556220 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 K7ENP7 123 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 YKT6O15498 198 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 FSBPO95073 299 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 SEMA4FO95754 770 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 TBX18O95935 607 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 EPHX1P07099 455 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 FAM163BP0C2L3 166 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 PTPN1P18031 435 aaKnown RBP7.2□□□□□ -1.26
ATXN3-236ENST00000556220 PRPHP41219 470 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 MFAP3P55082 362 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 ERVPABLB-1P60509 514 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 E2F1Q01094 437 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 NFATC3Q12968 1075 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 ZNF234Q14588 700 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 GEN1Q17RS7 908 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 ZC3H12AQ5D1E8 599 aaKnown RBP7.2□□□□□ -1.26
ATXN3-236ENST00000556220 KIAA1614Q5VZ46 1190 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 INO80CQ6PI98 192 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-236ENST00000556220 KDM7AQ6ZMT4 941 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 ATG14Q6ZNE5 492 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 CACUL1Q86Y37 369 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 SULF2Q8IWU5 870 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 PLD6Q8N2A8 252 aaKnown RBP7.2□□□□□ -1.26
ATXN3-236ENST00000556220 SCAMP5Q8TAC9 235 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 SKA1Q96BD8 255 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 P2RY11Q96G91 374 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 HPDLQ96IR7 371 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 FAM213AQ9BRX8 229 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 DUSP23Q9BVJ7 150 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 ZNF518BQ9C0D4 1074 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 ELOVL4Q9GZR5 314 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 NACA2Q9H009 215 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 LHX5Q9H2C1 402 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 ST6GALNAC4Q9H4F1 302 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 SGK2Q9HBY8 427 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 ELOVL2Q9NXB9 296 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 PLK2Q9NYY3 685 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 DCTN4Q9UJW0 460 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 NOL7Q9UMY1 257 aaKnown RBP7.2□□□□□ -1.26
ATXN3-236ENST00000556220 R3HCC1Q9Y3T6 440 aaKnown RBP7.2□□□□□ -1.26
ATXN3-236ENST00000556220 SPTBN1Q01082 2364 aaKnown RBP7.2□□□□□ -1.26
ATXN3-236ENST00000556220 PTPRJQ12913 1337 aa7.2□□□□□ -1.26
ATXN3-236ENST00000556220 COL5A1P20908 1838 aaPredicted RBP7.2□□□□□ -1.26
ATXN3-236ENST00000556220 A0A1W2PPC4 97 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 FAM92AA1XBS5 289 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 CLDN5O00501 218 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 TIMM44O43615 452 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 TLR5O60602 858 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 PENKP01210 267 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-236ENST00000556220 WNT1P04628 370 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 MPOP05164 745 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 FUT4P22083 530 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 NME2P22392 152 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 ACP1P24666 158 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 PRKCHP24723 683 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 RXRGP48443 463 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 LSSP48449 732 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 PGFP49763 221 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 TOB1P50616 345 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-236ENST00000556220 ZBTB16Q05516 673 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 BNIP3Q12983 259 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 CAMK2GQ13555 558 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-236ENST00000556220 IFI16Q16666 785 aaKnown RBP7.19□□□□□ -1.26
ATXN3-236ENST00000556220 TMEM119Q4V9L6 283 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 ZNF720Q7Z2F6 126 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 GPBP1Q86WP2 473 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 EXD3Q8N9H8 876 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 RBBP8NLQ8NC74 664 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-236ENST00000556220 RNF214Q8ND24 703 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 ZSWIM2Q8NEG5 633 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 PIWIL1Q96J94 861 aaKnown RBP7.19□□□□□ -1.26
ATXN3-236ENST00000556220 CDK5RAP3Q96JB5 506 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 C8orf76Q96K31 380 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 FAM84AQ96KN4 292 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 KCNK16Q96T55 309 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 MMS19Q96T76 1030 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 B3GNT5Q9BYG0 378 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 MTMR12Q9C0I1 747 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 IKZF4Q9H2S9 585 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 SNX25Q9H3E2 840 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 ZHX3Q9H4I2 956 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 COMMD8Q9NX08 183 aa7.19□□□□□ -1.26
ATXN3-236ENST00000556220 RBAKQ9NYW8 714 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-236ENST00000556220 LSM7Q9UK45 103 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms