RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 APOPT1Q96IL0 206 aa10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 SERAC1Q96JX3 654 aa10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 KLF6Q99612 283 aaPredicted RBP10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 GORASP1Q9BQQ3 440 aa10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 TRIM56Q9BRZ2 755 aaKnown RBP10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 UBE2OQ9C0C9 1292 aaKnown RBP10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 ZYG11BQ9C0D3 744 aa10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 CWH43Q9H720 699 aa10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 CASS4Q9NQ75 786 aa10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 TMEM39AQ9NV64 488 aa10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 PIH1D1Q9NWS0 290 aaKnown RBP10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 MPP6Q9NZW5 540 aa10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 MTRRQ9UBK8 725 aa10.32□□□□□ -0.76
EFCAB11-209ENST00000556005 MYO18AQ92614 2054 aaKnown RBP10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 SLC12A8A0AV02 714 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 SLC38A8A6NNN8 435 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 ANXA9O76027 345 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 NEBLO76041 1014 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 ZDHHC11BP0C7U3 371 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 CSH1P0DML2 217 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 CSH2P0DML3 217 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 PYGBP11216 843 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 FOXN2P32314 431 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 PAPOLAP51003 745 aaKnown RBP10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 RING1Q06587 406 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 CDH17Q12864 832 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 SPOUT1Q5T280 376 aaKnown RBP10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 ARTNQ5T4W7 220 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 RNF187Q5TA31 235 aaPredicted RBP10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 ARHGAP36Q6ZRI8 547 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 CCDC121Q6ZUS5 278 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 SH2D5Q6ZV89 423 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 MARK2Q7KZI7 788 aaKnown RBP10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 UMODL1-AS1Q8N2C9 162 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 CNTD1Q8N815 330 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 GIPC2Q8TF65 315 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 IL12RB2Q99665 862 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 MLPHQ9BV36 600 aaPredicted RBP10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 IL22Q9GZX6 179 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 IQCGQ9H095 443 aaKnown RBP10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 VPS11Q9H270 941 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 NDFIP2Q9NV92 336 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 TMEM248Q9NWD8 314 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 TBX21Q9UL17 535 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 MAGED2Q9UNF1 606 aaPredicted RBP10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 ATP11BQ9Y2G3 1177 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 USP15Q9Y4E8 981 aaPredicted RBP10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 RPS6KL1Q9Y6S9 549 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 PLXNA3P51805 1871 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 MYO16Q9Y6X6 1858 aa10.31□□□□□ -0.76
EFCAB11-209ENST00000556005 IGLV3-10A0A075B6K4 115 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 ABHD14A-ACY1A0A1B0GW23 586 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 MYO1CO00159 1063 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 COPEO14579 308 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 TLR5O60602 858 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 USP12O75317 370 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 USP1O94782 785 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 IGLV3-27P01718 113 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 ATF6P18850 670 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 OR1D2P34982 312 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 MGAT5Q09328 741 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 NIPAL4Q0D2K0 466 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 DNAJC3Q13217 504 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 TMEM135Q86UB9 458 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 KLHDC8BQ8IXV7 354 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 RNF168Q8IYW5 571 aaPredicted RBP10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 ZNF683Q8IZ20 524 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 ZNF276Q8N554 614 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 PDZD8Q8NEN9 1154 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 USP33Q8TEY7 942 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 OVCA2Q8WZ82 227 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 TOP1MTQ969P6 601 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 FCRL5Q96RD9 977 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 PLCD4Q9BRC7 762 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 TTLL2Q9BWV7 592 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 PRDM5Q9NQX1 630 aaPredicted RBP10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 TXNDC16Q9P2K2 825 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 HSFX1Q9UBD0 423 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 AFF4Q9UHB7 1163 aaKnown RBP10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 SCN5AQ14524 2016 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 FNDC1Q4ZHG4 1894 aaPredicted RBP10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 TANC1Q9C0D5 1861 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 NUP205Q92621 2012 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 FAM237BA0A1B0GVD1 139 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 CARNS1A5YM72 827 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 DRGXA6NNA5 263 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 UGT1A9O60656 530 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 SOD2P04179 222 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 CLTBP09497 229 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 ADRA1DP25100 572 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 ATP5C1P36542 298 aaKnown RBP10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 NEK3P51956 506 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 GEMP55040 296 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 OLIG2Q13516 323 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 FRG1Q14331 258 aaKnown RBP10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 ZKSCAN8Q15776 578 aaPredicted RBP10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 MROH9Q5TGP6 573 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 FBXL22Q6P050 247 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 TIFABQ6ZNK6 161 aa10.3□□□□□ -0.76
EFCAB11-209ENST00000556005 OTOP3Q7RTS5 596 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms