RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 USP33Q8TEY7 942 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 PPM1EQ8WY54 764 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 MYLIPQ8WY64 445 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 SEC14L1Q92503 715 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 SMARCD2Q92925 531 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 HDAC11Q96DB2 347 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 ZFYVE19Q96K21 471 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 NEUROG2Q9H2A3 272 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 POMKQ9H5K3 350 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 IPO11Q9UI26 975 aaKnown RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 RAB21Q9UL25 225 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 CDH7Q9ULB5 785 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 NFU1Q9UMS0 254 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 RAD54BQ9Y620 910 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 HOXD9P28356 352 aaPredicted RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 ECHS1P30084 290 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 GBP2P32456 591 aaPredicted RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 PLTPP55058 493 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 ZBTB17Q13105 803 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 HLTFQ14527 1009 aaKnown RBP eCLIP10.45□□□□□ -0.74
SRP54-208ENST00000555557 P3H1Q32P28 736 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 FAXCQ5TGI0 409 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 CXorf57Q6NSI4 855 aaKnown RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 CHST9Q7L1S5 443 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 CCDC13Q8IYE1 715 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 HJURPQ8NCD3 748 aaPredicted RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 SMRP1Q8NCR6 262 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 CDX2Q99626 313 aaPredicted RBP10.45□□□□□ -0.74
SRP54-208ENST00000555557 SPON2Q9BUD6 331 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 PCDH9Q9HC56 1237 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 GDE1Q9NZC3 331 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 GRHL1Q9NZI5 618 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 ACTL7AQ9Y615 435 aa10.45□□□□□ -0.74
SRP54-208ENST00000555557 BRWD1Q9NSI6 2320 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 TYW5A2RUC4 315 aaKnown RBP10.44□□□□□ -0.74
SRP54-208ENST00000555557 CFAP69A5D8W1 941 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ARHGAP42A6NI28 874 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 HEPACAM2A8MVW5 462 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 NEDD8-MDP1E9PL57 170 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 RNF103O00237 685 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 TP73O15350 636 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 LUC7L3O95232 432 aaKnown RBP10.44□□□□□ -0.74
SRP54-208ENST00000555557 JCHAINP01591 159 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 RHOCP08134 193 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 GLDCP23378 1020 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 FCARP24071 287 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 CCNCP24863 283 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 PTPN3P26045 913 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 MZF1P28698 734 aaPredicted RBP10.44□□□□□ -0.74
SRP54-208ENST00000555557 CLCN6P51797 869 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ITGA8P53708 1063 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 DRG2P55039 364 aaKnown RBP10.44□□□□□ -0.74
SRP54-208ENST00000555557 GNA12Q03113 381 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 COL19A1Q14993 1142 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ANO4Q32M45 955 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 MPPE1Q53F39 396 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ANKRD20A2Q5SQ80 823 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 LY6G5CQ5SRR4 150 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 C6orf118Q5T5N4 469 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ANKRD20A1Q5TYW2 823 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ANKRD20A3Q5VUR7 823 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 FYB2Q5VWT5 728 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 RNF219Q5W0B1 726 aaPredicted RBP10.44□□□□□ -0.74
SRP54-208ENST00000555557 IL31Q6EBC2 164 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ZDHHC24Q6UX98 284 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 MFN1Q8IWA4 741 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ZNF567Q8N184 647 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.44□□□□□ -0.74
SRP54-208ENST00000555557 BPIFB1Q8TDL5 484 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ARHGEF2Q92974 986 aaKnown RBP10.44□□□□□ -0.74
SRP54-208ENST00000555557 RTP4Q96DX8 246 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ASIC4Q96FT7 647 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 ZNF419Q96HQ0 510 aaPredicted RBP10.44□□□□□ -0.74
SRP54-208ENST00000555557 RIPOR3Q96MK2 946 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 GDAP1L1Q96MZ0 367 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 AGAP3Q96P47 875 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 DUS2Q9NX74 493 aaKnown RBP10.44□□□□□ -0.74
SRP54-208ENST00000555557 DONSONQ9NYP3 566 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 TBC1D14Q9P2M4 693 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 TBC1D30Q9Y2I9 924 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 DOCK4Q8N1I0 1966 aa10.44□□□□□ -0.74
SRP54-208ENST00000555557 C5orf60A6NFR6 353 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 GCATO75600 419 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 SEC31AO94979 1220 aaKnown RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 METTL18O95568 372 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 FAM153BP0C7A2 387 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 CCNB1P14635 433 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 TCF3P15923 654 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 WEE1P30291 646 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 ACTN2P35609 894 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 BASP1P80723 227 aaKnown RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 SERINC3Q13530 473 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 CDH18Q13634 790 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 SKIV2LQ15477 1246 aaKnown RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 PARP15Q460N3 678 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 FAM153CQ494X1 144 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 TTC39BQ5VTQ0 682 aaPredicted RBP10.43□□□□□ -0.74
SRP54-208ENST00000555557 IZUMO3Q5VZ72 239 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 FBXO38Q6PIJ6 1188 aa10.43□□□□□ -0.74
SRP54-208ENST00000555557 RHBDF2Q6PJF5 856 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms