RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 RAMP2O60895 175 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 HNRNPLP14866 589 aaKnown RBP eCLIP13□□□□□ -0.33
SYNE2-219ENST00000555323 ZFXP17010 805 aaPredicted RBP13□□□□□ -0.33
SYNE2-219ENST00000555323 MRPS21P82921 87 aaKnown RBP13□□□□□ -0.33
SYNE2-219ENST00000555323 SULT2A1Q06520 285 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 POLD3Q15054 466 aaPredicted RBP13□□□□□ -0.33
SYNE2-219ENST00000555323 E2F5Q15329 346 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 PARP15Q460N3 678 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 FUT11Q495W5 492 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 DCAF12L1Q5VU92 463 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 RNF219Q5W0B1 726 aaPredicted RBP13□□□□□ -0.33
SYNE2-219ENST00000555323 MBLAC2Q68D91 279 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 NCBP2-AS2Q69YL0 99 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 TMCO3Q6UWJ1 677 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 LRRC49Q8IUZ0 686 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 SFTPA1Q8IWL2 248 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 ARHGAP12Q8IWW6 846 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 SLC35F6Q8N357 371 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 NPWQ8N729 165 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 PSMB7Q99436 277 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 MAK16Q9BXY0 300 aaKnown RBP13□□□□□ -0.33
SYNE2-219ENST00000555323 SLC39A8Q9C0K1 460 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 CARD9Q9H257 536 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 EPHX3Q9H6B9 360 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 LMAN1LQ9HAT1 526 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 HCN2Q9UL51 889 aa13□□□□□ -0.33
SYNE2-219ENST00000555323 MTF2Q9Y483 593 aaPredicted RBP13□□□□□ -0.33
SYNE2-219ENST00000555323 KDELR3O43731 214 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 ZMPSTE24O75844 475 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 ASLP04424 464 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 ATP5BP06576 529 aaKnown RBP12.99□□□□□ -0.33
SYNE2-219ENST00000555323 DLDP09622 509 aaKnown RBP12.99□□□□□ -0.33
SYNE2-219ENST00000555323 POLR2EP19388 210 aaKnown RBP12.99□□□□□ -0.33
SYNE2-219ENST00000555323 SERPINB6P35237 376 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 CETN2P41208 172 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 RPS9P46781 194 aaKnown RBP12.99□□□□□ -0.33
SYNE2-219ENST00000555323 NR2C2P49116 596 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 CLCN5P51795 746 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 KDSRQ06136 332 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 SLC20A2Q08357 652 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 ENPP2Q13822 863 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 TFDP2Q14188 446 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 LRRC32Q14392 662 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 HSF5Q4G112 596 aaPredicted RBP12.99□□□□□ -0.33
SYNE2-219ENST00000555323 MAMSTRQ6ZN01 415 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 PLD5Q8N7P1 536 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 KDM1BQ8NB78 822 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 PJA1Q8NG27 643 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 OSBPL8Q9BZF1 889 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 FOXQ1Q9C009 403 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 MUC3BQ9H195 1237 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 THAP10Q9P2Z0 257 aaPredicted RBP12.99□□□□□ -0.33
SYNE2-219ENST00000555323 NDRG2Q9UN36 371 aaKnown RBP12.99□□□□□ -0.33
SYNE2-219ENST00000555323 SIT1Q9Y3P8 196 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 RAD54BQ9Y620 910 aa12.99□□□□□ -0.33
SYNE2-219ENST00000555323 TECTAO75443 2155 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 ARHGAP42A6NI28 874 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 CHURC1-FNTBB4DL54 471 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 RASA4BC9J798 803 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 APOL1O14791 398 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 RASA4O43374 803 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 CST8O60676 142 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 PDGFBP01127 241 aaPredicted RBP12.98□□□□□ -0.33
SYNE2-219ENST00000555323 SRPRAP08240 638 aaKnown RBP12.98□□□□□ -0.33
SYNE2-219ENST00000555323 KRT10P13645 584 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 PRLRP16471 622 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 ACVRL1P37023 503 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 GNG11P61952 73 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 ADCY2Q08462 1091 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 SLC10A2Q12908 348 aaPredicted RBP12.98□□□□□ -0.33
SYNE2-219ENST00000555323 SERINC3Q13530 473 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 UBXN2BQ14CS0 331 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 PTPRNQ16849 979 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 EMC10Q5UCC4 262 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 CWF19L1Q69YN2 538 aaKnown RBP12.98□□□□□ -0.33
SYNE2-219ENST00000555323 BBS12Q6ZW61 710 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 CCDC105Q8IYK2 499 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 OR7D4Q8NG98 312 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 USP33Q8TEY7 942 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 UCMAQ8WVF2 138 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 HMCESQ96FZ2 354 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 MYO19Q96H55 970 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 MRGPRX3Q96LB0 322 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 C2orf49Q9BVC5 232 aaPredicted RBP12.98□□□□□ -0.33
SYNE2-219ENST00000555323 DLGAP2Q9P1A6 1054 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 VPS28Q9UK41 221 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 MFHAS1Q9Y4C4 1052 aa12.98□□□□□ -0.33
SYNE2-219ENST00000555323 KIAA1549LQ6ZVL6 1849 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 TTC28Q96AY4 2481 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 ANTXRLA6NF34 631 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 ZSCAN5CA6NGD5 496 aaPredicted RBP12.97□□□□□ -0.33
SYNE2-219ENST00000555323 ENC1O14682 589 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 TJP3O95049 919 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 CD160O95971 181 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 AOC1P19801 751 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 TGM2P21980 687 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 MAGEA9P43362 315 aa12.97□□□□□ -0.33
SYNE2-219ENST00000555323 PAPOLAP51003 745 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms