RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ZNF354CQ86Y25 554 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 KIAA2013Q8IYS2 634 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 ZNF683Q8IZ20 524 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 DCLK2Q8N568 766 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 GANCQ8TET4 914 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
SRP54-206ENST00000555317 CCDC42Q96M95 316 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 SPON2Q9BUD6 331 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 NUP85Q9BW27 656 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 MKRN2Q9H000 416 aaKnown RBP12.42□□□□□ -0.42
SRP54-206ENST00000555317 THAP2Q9H0W7 228 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 DUSP15Q9H1R2 295 aaPredicted RBP12.42□□□□□ -0.42
SRP54-206ENST00000555317 ARHGAP20Q9P2F6 1191 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 PCDHGA5Q9Y5G8 931 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 CEP192Q8TEP8 1941 aa12.42□□□□□ -0.42
SRP54-206ENST00000555317 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 TARSL2A2RTX5 802 aaKnown RBP12.41□□□□□ -0.42
SRP54-206ENST00000555317 TTC34A8MYJ7 566 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 CBX4O00257 560 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 CREB3O43889 395 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 FOXD2O60548 495 aaPredicted RBP12.41□□□□□ -0.42
SRP54-206ENST00000555317 LRIG2O94898 1065 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 RHOQP17081 205 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 EPHB2P29323 1055 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 L1CAMP32004 1257 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 TPI1P60174 286 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 OGDHQ02218 1023 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 ZBTB16Q05516 673 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 GFPT1Q06210 699 aaPredicted RBP12.41□□□□□ -0.42
SRP54-206ENST00000555317 SLC18A3Q16572 532 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 SPDYCQ5MJ68 293 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 IL31Q6EBC2 164 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 RETSATQ6NUM9 610 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 ARMCX6Q7L4S7 300 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 DSG4Q86SJ6 1040 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 METTL3Q86U44 580 aaKnown RBP12.41□□□□□ -0.42
SRP54-206ENST00000555317 TMEFF1Q8IYR6 380 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 DCAF4L2Q8NA75 395 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 ATP11CQ8NB49 1132 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 MRGPRX3Q96LB0 322 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 CCDC114Q96M63 670 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 RBSNQ9H1K0 784 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 ARRDC1-AS1Q9H2J1 176 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 CATSPERBQ9H7T0 1116 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 CD248Q9HCU0 757 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 ATP13A1Q9HD20 1204 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 PRSS16Q9NQE7 514 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 DONSONQ9NYP3 566 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 PCSK1NQ9UHG2 260 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 ANAPC7Q9UJX3 599 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 FZD10Q9ULW2 581 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 HPCAL4Q9UM19 191 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 AP4E1Q9UPM8 1137 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 NCKAP1Q9Y2A7 1128 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
SRP54-206ENST00000555317 DMXL1Q9Y485 3027 aa12.41□□□□□ -0.42
SRP54-206ENST00000555317 NYNRINQ9P2P1 1898 aaKnown RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 PI4KAP42356 2102 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 IGHV1OR15-9A0A0B4J2B8 117 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 EIF3CLB5ME19 914 aaKnown RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 FAM72CH0Y354 149 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 FGF10O15520 208 aaPredicted RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 DAPK3O43293 454 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 BNIP3LO60238 219 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 RAMP2O60895 175 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 SIN3BO75182 1162 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 CD6P30203 668 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 HTR7P34969 479 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 MPLP40238 635 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 DPP6P42658 865 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 SSR1P43307 286 aaKnown RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 TPMTP51580 245 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 COPAP53621 1224 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 GNA12Q03113 381 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 LMNB2Q03252 620 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 PIGHQ14442 188 aaPredicted RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 ELAVL3Q14576 367 aaKnown RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 ARID5BQ14865 1188 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 ACAP1Q15027 740 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 ERMARDQ5T6L9 678 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 FAM72AQ5TYM5 149 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 MANEALQ5VSG8 457 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 LYSMD4Q5XG99 296 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 FAM72DQ6L9T8 149 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 FAM124AQ86V42 546 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 FAM72BQ86X60 149 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 PYROXD2Q8N2H3 581 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 C12orf50Q8NA57 414 aaPredicted RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 OR8D1Q8WZ84 308 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 TOE1Q96GM8 510 aaKnown RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 EIF3CQ99613 913 aaKnown RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 MTG2Q9H4K7 406 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 DHX35Q9H5Z1 703 aaKnown RBP12.4□□□□□ -0.42
SRP54-206ENST00000555317 SEMA4GQ9NTN9 838 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 TMEM248Q9NWD8 314 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 CTTNBP2NLQ9P2B4 639 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 IP6K2Q9UHH9 426 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 DNAI1Q9UI46 699 aa12.4□□□□□ -0.42
SRP54-206ENST00000555317 VPS51Q9UID3 782 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms