RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LRRC19Q9H756 370 aa14.64□□□□□ -0.07
CHD8-208ENST00000555301 ATP13A1Q9HD20 1204 aa14.64□□□□□ -0.07
CHD8-208ENST00000555301 ETNK2Q9NVF9 386 aa14.64□□□□□ -0.07
CHD8-208ENST00000555301 INTS6Q9UL03 887 aaKnown RBP14.64□□□□□ -0.07
CHD8-208ENST00000555301 SIT1Q9Y3P8 196 aa14.64□□□□□ -0.07
CHD8-208ENST00000555301 OR51B4Q9Y5P0 310 aa14.64□□□□□ -0.07
CHD8-208ENST00000555301 COL4A3Q01955 1670 aa14.64□□□□□ -0.07
CHD8-208ENST00000555301 hCG_1818297A0A087WSY0 165 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 A0A0D9SEW6 157 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 CXorf51AA0A1B0GTR3 108 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 ARHGAP42A6NI28 874 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 RASA4BC9J798 803 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 APOL1O14791 398 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 NPC1O15118 1278 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 RASA4O43374 803 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 DLDP09622 509 aaKnown RBP14.63□□□□□ -0.07
CHD8-208ENST00000555301 PYGMP11217 842 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 GNG11P61952 73 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 MRPS21P82921 87 aaKnown RBP14.63□□□□□ -0.07
CHD8-208ENST00000555301 PAFAH1B3Q15102 231 aaKnown RBP14.63□□□□□ -0.07
CHD8-208ENST00000555301 AFMIDQ63HM1 303 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 TMEM215Q68D42 235 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 NCBP2-AS2Q69YL0 99 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 TRMT11Q7Z4G4 463 aaKnown RBP14.63□□□□□ -0.07
CHD8-208ENST00000555301 APCDD1Q8J025 514 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 PQLC3Q8N755 202 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 OR7D4Q8NG98 312 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 EZH1Q92800 747 aaPredicted RBP14.63□□□□□ -0.07
CHD8-208ENST00000555301 ARHGEF2Q92974 986 aaKnown RBP14.63□□□□□ -0.07
CHD8-208ENST00000555301 SPON2Q9BUD6 331 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 TLR10Q9BXR5 811 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 ACE2Q9BYF1 805 aaPredicted RBP14.63□□□□□ -0.07
CHD8-208ENST00000555301 OSBPL8Q9BZF1 889 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 KLC2Q9H0B6 622 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 CARD9Q9H257 536 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 NOL6Q9H6R4 1146 aaKnown RBP14.63□□□□□ -0.07
CHD8-208ENST00000555301 LMAN1LQ9HAT1 526 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 HPCAL4Q9UM19 191 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 PLA2G4CQ9UP65 541 aa14.63□□□□□ -0.07
CHD8-208ENST00000555301 TICRRQ7Z2Z1 1910 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 KCNK3O14649 394 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 CST8O60676 142 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 RNF40O75150 1001 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 KRT10P13645 584 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 HNRNPLP14866 589 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHD8-208ENST00000555301 MAGEA9P43362 315 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 KIR2DL1P43626 348 aaPredicted RBP14.62□□□□□ -0.07
CHD8-208ENST00000555301 RPS9P46781 194 aaKnown RBP14.62□□□□□ -0.07
CHD8-208ENST00000555301 ECT2LQ008S8 904 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 HSF5Q4G112 596 aaPredicted RBP14.62□□□□□ -0.07
CHD8-208ENST00000555301 SEL1L2Q5TEA6 688 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 KAZNQ674X7 775 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 RETSATQ6NUM9 610 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 BZW1Q7L1Q6 419 aaKnown RBP14.62□□□□□ -0.07
CHD8-208ENST00000555301 BMP8AQ7Z5Y6 402 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 ZNF354CQ86Y25 554 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 LRRC49Q8IUZ0 686 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 ARHGAP12Q8IWW6 846 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 C17orf53Q8N3J3 647 aaPredicted RBP14.62□□□□□ -0.07
CHD8-208ENST00000555301 NPWQ8N729 165 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 ZNF513Q8N8E2 541 aaPredicted RBP14.62□□□□□ -0.07
CHD8-208ENST00000555301 KDM1BQ8NB78 822 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 CLDN23Q96B33 292 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 CELF6Q96J87 481 aaKnown RBP14.62□□□□□ -0.07
CHD8-208ENST00000555301 SLC39A8Q9C0K1 460 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 MTF2Q9Y483 593 aaPredicted RBP14.62□□□□□ -0.07
CHD8-208ENST00000555301 RAD54BQ9Y620 910 aa14.62□□□□□ -0.07
CHD8-208ENST00000555301 MYO10Q9HD67 2058 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 ZSCAN5CA6NGD5 496 aaPredicted RBP14.61□□□□□ -0.07
CHD8-208ENST00000555301 CBX4O00257 560 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 DFFAO00273 331 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 ENC1O14682 589 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 KDELR3O43731 214 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 ATG13O75143 517 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 TJP3O95049 919 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 SRPRAP08240 638 aaKnown RBP14.61□□□□□ -0.07
CHD8-208ENST00000555301 AOC1P19801 751 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 MX2P20592 715 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 TGM2P21980 687 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 ACVRL1P37023 503 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 NNMTP40261 264 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 NR2C2P49116 596 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 VASPP50552 380 aaPredicted RBP14.61□□□□□ -0.07
CHD8-208ENST00000555301 PAPOLAP51003 745 aaKnown RBP14.61□□□□□ -0.07
CHD8-208ENST00000555301 CLCN5P51795 746 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 SEC13P55735 322 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 GEMIN4P57678 1058 aaKnown RBP14.61□□□□□ -0.07
CHD8-208ENST00000555301 ST8SIA6P61647 398 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 SLC20A2Q08357 652 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 ZNF211Q13398 564 aaPredicted RBP14.61□□□□□ -0.07
CHD8-208ENST00000555301 FZD5Q13467 585 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 SERINC3Q13530 473 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 DCAF12L1Q5VU92 463 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 CWF19L1Q69YN2 538 aaKnown RBP14.61□□□□□ -0.07
CHD8-208ENST00000555301 SDE2Q6IQ49 451 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 BBS12Q6ZW61 710 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 SFTPA1Q8IWL2 248 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 CCDC105Q8IYK2 499 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 PLD5Q8N7P1 536 aa14.61□□□□□ -0.07
CHD8-208ENST00000555301 USP33Q8TEY7 942 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms