RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 MANEAQ5SRI9 462 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 MFSD4BQ5TF39 518 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 ZNF549Q6P9A3 640 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 TCP11L2Q8N4U5 519 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 EID2BQ96D98 161 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 TUBB6Q9BUF5 446 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 EIF2AQ9BY44 585 aaKnown RBP5.79□□□□□ -1.48
VRK1-203ENST00000555067 AGXT2Q9BYV1 514 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 TMEM8AQ9HCN3 771 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 SAYSD1Q9NPB0 183 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 PAPOLBQ9NRJ5 636 aaKnown RBP5.79□□□□□ -1.48
VRK1-203ENST00000555067 ABHD10Q9NUJ1 306 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 TBC1D23Q9NUY8 699 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 TMEM160Q9NX00 188 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 NSMCE4AQ9NXX6 385 aa5.79□□□□□ -1.48
VRK1-203ENST00000555067 ORC3Q9UBD5 711 aaPredicted RBP5.79□□□□□ -1.48
VRK1-203ENST00000555067 SLC22A23A1A5C7 686 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 HMX3A6NHT5 357 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 CLCA1A8K7I4 914 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 TTC34A8MYJ7 566 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 TLX3O43711 291 aaPredicted RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 SYF2O95926 243 aaKnown RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 AKR1B1P15121 316 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 TFEBP19484 476 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 MATN1P21941 496 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 GABRB3P28472 473 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 ALDH7A1P49419 539 aaKnown RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 PAPOLAP51003 745 aaKnown RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 CUL4BQ13620 913 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 KCNJ12Q14500 433 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 CFAP58Q5T655 872 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 CCDC129Q6ZRS4 1044 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 KRT28Q7Z3Y7 464 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 PELI3Q8N2H9 469 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 SLC44A5Q8NCS7 719 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 OR1N1Q8NGS0 311 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 TDRD7Q8NHU6 1098 aaKnown RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 AFG1LQ8WV93 481 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 ZUFSPQ96AP4 578 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 PRR11Q96HE9 360 aaPredicted RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 THOC3Q96J01 351 aaKnown RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 PAIP1Q9H074 479 aaKnown RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 HIPK2Q9H2X6 1198 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 MLXIPLQ9NP71 852 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 NECTIN3Q9NQS3 549 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 MRGBPQ9NV56 204 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 NFKBIL1Q9UBC1 381 aaPredicted RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 GIMAP2Q9UG22 337 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 ARHGAP26Q9UNA1 814 aa5.78□□□□□ -1.48
VRK1-203ENST00000555067 HEMK1Q9Y5R4 338 aaPredicted RBP5.78□□□□□ -1.48
VRK1-203ENST00000555067 FAM170AA1A519 330 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 TSPY2A6NKD2 308 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 C16orf96A6NNT2 1141 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 P4HA2O15460 535 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 ASNA1O43681 348 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 RTN3O95197 1032 aaPredicted RBP5.77□□□□□ -1.49
VRK1-203ENST00000555067 SLC3A2P08195 630 aaKnown RBP5.77□□□□□ -1.49
VRK1-203ENST00000555067 FGF2P09038 288 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 TSPY3P0CV98 308 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 TSPY8P0CW00 308 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 TGFB3P10600 412 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 YY1P25490 414 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 CALRP27797 417 aaKnown RBP5.77□□□□□ -1.49
VRK1-203ENST00000555067 CST5P28325 142 aaPredicted RBP5.77□□□□□ -1.49
VRK1-203ENST00000555067 STAT1P42224 750 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 PNLIPRP1P54315 467 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 TSPY1Q01534 308 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 UBE3AQ05086 875 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 GPS1Q13098 491 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 MTA1Q13330 715 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 FHL3Q13643 280 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 SLC9C2Q5TAH2 1124 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 ZSCAN30Q86W11 494 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 NRSN1Q8IZ57 195 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 ZMIZ2Q8NF64 920 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 ABHD5Q8WTS1 349 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 COG8Q96MW5 612 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 C7orf26Q96N11 449 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 WDR24Q96S15 920 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 CCDC68Q9H2F9 335 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 GHITMQ9H3K2 345 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 RETREG1Q9H6L5 497 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 ZBTB26Q9HCK0 441 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 RXFP3Q9NSD7 469 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 DECR2Q9NUI1 292 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 RGL1Q9NZL6 768 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 HERC5Q9UII4 1024 aaKnown RBP5.77□□□□□ -1.49
VRK1-203ENST00000555067 LMTK3Q96Q04 1460 aa5.77□□□□□ -1.49
VRK1-203ENST00000555067 ZNF335Q9H4Z2 1342 aaPredicted RBP5.76□□□□□ -1.49
VRK1-203ENST00000555067 RSF1Q96T23 1441 aaPredicted RBP5.76□□□□□ -1.49
VRK1-203ENST00000555067 CTIFO43310 598 aaKnown RBP5.76□□□□□ -1.49
VRK1-203ENST00000555067 DNTTP04053 509 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 T-ENOLP0DO92 83 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 GYS1P13807 737 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 ST6GAL1P15907 406 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 OAS2P29728 719 aaKnown RBP5.76□□□□□ -1.49
VRK1-203ENST00000555067 PBX1P40424 430 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 VPS41P49754 854 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 PRKAA2P54646 552 aa5.76□□□□□ -1.49
VRK1-203ENST00000555067 VAMP2P63027 116 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms