RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 FDFT1P37268 417 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 GRIA4P48058 902 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 WASHC5Q12768 1159 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 C9orf57Q5W0N0 161 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 OLFML2BQ68BL8 750 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 MBLAC2Q68D91 279 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 SLC27A1Q6PCB7 646 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 TFAP2DQ7Z6R9 452 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 ANKRD52Q8NB46 1076 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 B3GALNT2Q8NCR0 500 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 PABPC5Q96DU9 382 aaKnown RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 VPS39Q96JC1 886 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 QKIQ96PU8 341 aaKnown RBP eCLIP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 PIF1Q9H611 641 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 WDCPQ9H6R7 721 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 S100A14Q9HCY8 104 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 CCDC167Q9P0B6 97 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 POMPQ9Y244 141 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 CDY2AQ9Y6F7 541 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 CDY1Q9Y6F8 540 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 YJEFN3A6XGL0 299 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 MEIS3P2A8K0S8 358 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 TRAFD1O14545 582 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 TSPAN3O60637 253 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 MYCP01106 439 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 FAM200BP0CF97 657 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 YBX3P16989 372 aaKnown RBP eCLIP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 PLIN5Q00G26 463 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 GRM3Q14832 879 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 SEL1L3Q68CR1 1132 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 NAPRTQ6XQN6 538 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 ERO1BQ86YB8 467 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 ABTB1Q969K4 478 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 ACE2Q9BYF1 805 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 DNAI2Q9GZS0 605 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 TKTL2Q9H0I9 626 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 ADAMTS6Q9UKP5 1117 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 TRIM13O60858 407 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 HDCP19113 662 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 PMLP29590 882 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 RANBP1P43487 201 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 SERPINB8P50452 374 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 RALGDSQ12967 914 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 PITRM1Q5JRX3 1037 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 SLC9A4Q6AI14 798 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 TMC7Q7Z402 723 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 SATL1Q86VE3 508 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 BHLHE22Q8NFJ8 381 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 PRPF18Q99633 342 aaKnown RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 FICDQ9BVA6 458 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 GATA5Q9BWX5 397 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 FTHL17Q9BXU8 183 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 FRMD8Q9BZ67 464 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-208ENST00000554811 PLAC1Q9HBJ0 212 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 KIAA1257Q9ULG3 409 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 AURKCQ9UQB9 309 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 NME7Q9Y5B8 376 aa12.1□□□□□ -0.47
XRCC3-208ENST00000554811 SMIM28A0A1B0GU29 152 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 NRP1O14786 923 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 ZBTB14O43829 449 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 PROZP22891 400 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 MATKP42679 507 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 MAXP61244 160 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 KLF10Q13118 480 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 KIF19Q2TAC6 998 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 ARL13AQ5H913 290 aaPredicted RBP12.09□□□□□ -0.47
XRCC3-208ENST00000554811 LRRC8EQ6NSJ5 796 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 ANKRD13AQ8IZ07 590 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 EME1Q96AY2 570 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 HDAC11Q96DB2 347 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 EMCNQ9ULC0 261 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 UBQLN1Q9UMX0 589 aaKnown RBP12.09□□□□□ -0.47
XRCC3-208ENST00000554811 A0A088AWK7 358 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 STAMBPO95630 424 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 CCNFP41002 786 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 CHRNA4P43681 627 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 ARHGAP1Q07960 439 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 TEX44Q53QW1 395 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 SDHAF4Q5VUM1 108 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 ZNF470Q6ECI4 717 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 PAOXQ6QHF9 649 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 LRRC39Q96DD0 335 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 GAD1Q99259 594 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 CCDC106Q9BWC9 280 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 SUDS3Q9H7L9 328 aaPredicted RBP12.09□□□□□ -0.47
XRCC3-208ENST00000554811 XPR1Q9UBH6 696 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 ZNF112Q9UJU3 913 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 A6NHS1 94 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 MDM4O15151 490 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 MSI1O43347 362 aaKnown RBP12.09□□□□□ -0.47
XRCC3-208ENST00000554811 GCATO75600 419 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 POMCP01189 267 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 PIRTP0C851 137 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 ARL13BQ3SXY8 428 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 GPRC5AQ8NFJ5 357 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 ZNF560Q96MR9 790 aa12.09□□□□□ -0.47
XRCC3-208ENST00000554811 FETUBQ9UGM5 382 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms