RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 ZC3H10Q96K80 434 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 PSMB7Q99436 277 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 PRDM16Q9HAZ2 1276 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 GPATCH2LQ9NWQ4 482 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 CTTNBP2NLQ9P2B4 639 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 UVRAGQ9P2Y5 699 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 IP6K2Q9UHH9 426 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 ANAPC7Q9UJX3 599 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 USP18Q9UMW8 372 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 AP4E1Q9UPM8 1137 aa13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 SMG5Q9UPR3 1016 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-209ENST00000554768 OTOGLQ3ZCN5 2332 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 TARSL2A2RTX5 802 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 EIF3CLB5ME19 914 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 CREB3O43889 395 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 GFRA3O60609 400 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 LCA5LO95447 670 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 MT-CO1P00395 513 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 FECHP22830 423 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 IL1R2P27930 398 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 EPHB2P29323 1055 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 CDC25BP30305 580 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 MAPKAPK2P49137 400 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 KRT83P78385 493 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 GNA12Q03113 381 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 LPAL2Q16609 132 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 BOLA3Q53S33 107 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 C9orf64Q5T6V5 341 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 PRR23BQ6ZRT6 265 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 KBTBD6Q86V97 674 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 FAM160A2Q8N612 972 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 OR7D4Q8NG98 312 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 OR2T3Q8NH03 318 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 ZNF564Q8TBZ8 553 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 FRS2Q8WU20 508 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 EIF3CQ99613 913 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 EPAS1Q99814 870 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 SPON2Q9BUD6 331 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 C2orf49Q9BVC5 232 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 ACE2Q9BYF1 805 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 DUSP15Q9H1R2 295 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 DHX35Q9H5Z1 703 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 ITM2CQ9NQX7 267 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 DNAI1Q9UI46 699 aa13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 MBD1Q9UIS9 605 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-209ENST00000554768 EDDM13A0A1B0GTR0 161 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 WASH4PA8MWX3 477 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 ATP9BO43861 1147 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 SNAP91O60641 907 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 SIN3BO75182 1162 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 ZNF217O75362 1048 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 ZMPSTE24O75844 475 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 PROSCO94903 275 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 BCKDHBP21953 392 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 HTR7P34969 479 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 NNMTP40261 264 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 BYSLQ13895 437 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 TCEAL1Q15170 157 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 PLK5Q496M5 336 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 LAIR1Q6GTX8 287 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 CCDC170Q8IYT3 715 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 RTL3Q8N8U3 475 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 DCAF4L2Q8NA75 395 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 SLC35G2Q8TBE7 412 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 PTPRN2Q92932 1015 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 SIPA1Q96FS4 1042 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 FAM129BQ96TA1 746 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 RSPH9Q9H1X1 276 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 NOL6Q9H6R4 1146 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 FBRSQ9HAH7 460 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 OSGEPQ9NPF4 335 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 RAB23Q9ULC3 237 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 INTUQ9ULD6 942 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 HS3ST2Q9Y278 367 aa13.23□□□□□ -0.29
MTHFD1-209ENST00000554768 PTPRZ1P23471 2315 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 CBX4O00257 560 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 FGF10O15520 208 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 MTA2O94776 668 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 RARAP10276 462 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 SRCP12931 536 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 VAV1P15498 845 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 GLDCP23378 1020 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 ACVRL1P37023 503 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 MAGEA1P43355 309 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 HCAR3P49019 387 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 RPS14P62263 151 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 SLC25A11Q02978 314 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 DLG2Q15700 870 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 TXNRD3NBQ6F5E7 133 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 LINGO4Q6UY18 593 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 C11orf74Q86VG3 221 aa13.22□□□□□ -0.29
MTHFD1-209ENST00000554768 CPNE8Q86YQ8 564 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms