RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 PSMB7Q99436 277 aa13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 PRDM16Q9HAZ2 1276 aa13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 GPATCH2LQ9NWQ4 482 aa13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 CTTNBP2NLQ9P2B4 639 aa13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 UVRAGQ9P2Y5 699 aa13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 IP6K2Q9UHH9 426 aa13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 ANAPC7Q9UJX3 599 aa13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 USP18Q9UMW8 372 aa13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 AP4E1Q9UPM8 1137 aa13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 SMG5Q9UPR3 1016 aaKnown RBP13.25□□□□□ -0.29
MTHFD1-208ENST00000554739 OTOGLQ3ZCN5 2332 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 TARSL2A2RTX5 802 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 EIF3CLB5ME19 914 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 CREB3O43889 395 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 GFRA3O60609 400 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 LCA5LO95447 670 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 MT-CO1P00395 513 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 FECHP22830 423 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 IL1R2P27930 398 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 EPHB2P29323 1055 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 CDC25BP30305 580 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 MAPKAPK2P49137 400 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 KRT83P78385 493 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 GNA12Q03113 381 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 LPAL2Q16609 132 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 BOLA3Q53S33 107 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 C9orf64Q5T6V5 341 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 PRR23BQ6ZRT6 265 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 KBTBD6Q86V97 674 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 FAM160A2Q8N612 972 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 OR7D4Q8NG98 312 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 OR2T3Q8NH03 318 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 ZNF564Q8TBZ8 553 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 FRS2Q8WU20 508 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 EIF3CQ99613 913 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 EPAS1Q99814 870 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 SPON2Q9BUD6 331 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 SNRNP25Q9BV90 132 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 C2orf49Q9BVC5 232 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 ACE2Q9BYF1 805 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 DUSP15Q9H1R2 295 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 DHX35Q9H5Z1 703 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 ITM2CQ9NQX7 267 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 DNAI1Q9UI46 699 aa13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 MBD1Q9UIS9 605 aaPredicted RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
MTHFD1-208ENST00000554739 EDDM13A0A1B0GTR0 161 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 WASH4PA8MWX3 477 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 ATP9BO43861 1147 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 SNAP91O60641 907 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 SIN3BO75182 1162 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 ZNF217O75362 1048 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 ZMPSTE24O75844 475 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 PROSCO94903 275 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 BCKDHBP21953 392 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 HTR7P34969 479 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 NNMTP40261 264 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 BYSLQ13895 437 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 TCEAL1Q15170 157 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 PLK5Q496M5 336 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 LAIR1Q6GTX8 287 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 CCDC170Q8IYT3 715 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 RTL3Q8N8U3 475 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 DCAF4L2Q8NA75 395 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 SLC35G2Q8TBE7 412 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 PTPRN2Q92932 1015 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 SIPA1Q96FS4 1042 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 FAM129BQ96TA1 746 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 RSPH9Q9H1X1 276 aaPredicted RBP13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 NOL6Q9H6R4 1146 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 FBRSQ9HAH7 460 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 OSGEPQ9NPF4 335 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 RAB23Q9ULC3 237 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 INTUQ9ULD6 942 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 HS3ST2Q9Y278 367 aa13.23□□□□□ -0.29
MTHFD1-208ENST00000554739 PTPRZ1P23471 2315 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 CBX4O00257 560 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 FGF10O15520 208 aaPredicted RBP13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 MTA2O94776 668 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 RARAP10276 462 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 SRCP12931 536 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 VAV1P15498 845 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 GLDCP23378 1020 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 ACVRL1P37023 503 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 MAGEA1P43355 309 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 HCAR3P49019 387 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 RPS14P62263 151 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 SLC25A11Q02978 314 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 SLC20A2Q08357 652 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 DLG2Q15700 870 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 TXNRD3NBQ6F5E7 133 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 LINGO4Q6UY18 593 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 C11orf74Q86VG3 221 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 CPNE8Q86YQ8 564 aa13.22□□□□□ -0.29
MTHFD1-208ENST00000554739 TMTC1Q8IUR5 882 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms