RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 TTC38Q5R3I4 469 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 LY6G5CQ5SRR4 150 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 C10orf76Q5T2E6 689 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 SLFN12LQ6IEE8 588 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 FAM171BQ6P995 826 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 VSTM1Q6UX27 236 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 C4orf50Q6ZRC1 276 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 DENND5BQ6ZUT9 1274 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 NT5DC4Q86YG4 428 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 CHPFQ8IZ52 775 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 TMEM86AQ8N2M4 240 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 PDCL2Q8N4E4 241 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 NAT16Q8N8M0 369 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 IGSF22Q8N9C0 903 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 SYT2Q8N9I0 419 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-229ENST00000554672 TP53I13Q8NBR0 393 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-229ENST00000554672 WBP1Q96G27 269 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 ZNF560Q96MR9 790 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 PKMYT1Q99640 499 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 TM9SF2Q99805 663 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 FOXP1Q9H334 677 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-229ENST00000554672 CLMPQ9H6B4 373 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 IL21RQ9HBE5 538 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 ITM2CQ9NQX7 267 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 CFAP97Q9P2B7 532 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 MAGEC2Q9UBF1 373 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-229ENST00000554672 PCDHB6Q9Y5E3 794 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 CPQQ9Y646 472 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 WDR81Q562E7 1941 aa5.12□□□□□ -1.59
ATXN3-229ENST00000554672 DSPP15924 2871 aaKnown RBP5.12□□□□□ -1.59
ATXN3-229ENST00000554672 LAMA5O15230 3695 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 ASH1LQ9NR48 2969 aaKnown RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 SPAG17Q6Q759 2223 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 MEI4A8MW99 385 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 PLK4O00444 970 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 GABRDO14764 452 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 HOXC11O43248 304 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 IL18RAPO95256 599 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 C1SP09871 688 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 PLA2G4BP0C869 781 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 NCAM1P13591 858 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 ACAT1P24752 427 aaKnown RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 ANXA13P27216 316 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 GRK6P43250 576 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 ACOT2P49753 483 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 ZNF132P52740 706 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 BNC1Q01954 994 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 MAPRE1Q15691 268 aaKnown RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 ANO4Q32M45 955 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 TAF1BQ53T94 588 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 HLA-DQA1Q5Y7H0 255 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 ADALQ6DHV7 355 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 GRAMD4Q6IC98 578 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 DHRS13Q6UX07 377 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 DPH6Q7L8W6 267 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 KCNK18Q7Z418 384 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 MIB1Q86YT6 1006 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 LURAP1LQ8IV03 231 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 ZCCHC9Q8N567 271 aaKnown RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 MYCT1Q8N699 235 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 NECAB1Q8N987 351 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 TERB1Q8NA31 727 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 SYT8Q8NBV8 401 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 NSUN7Q8NE18 718 aaKnown RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 CACTINQ8WUQ7 758 aaKnown RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 SCFD1Q8WVM8 642 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 FGF11Q92914 225 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 NXPE2Q96DL1 559 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 TOE1Q96GM8 510 aaKnown RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 MRGPRX1Q96LB2 322 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 FERD3LQ96RJ6 166 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 ACOX2Q99424 681 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 GABRG3Q99928 467 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 NUP58Q9BVL2 599 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 TTLL2Q9BWV7 592 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 GPR174Q9BXC1 333 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 CD248Q9HCU0 757 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 SPHK2Q9NRA0 654 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 SMPD4Q9NXE4 827 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 GDAP2Q9NXN4 497 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 WSB2Q9NYS7 404 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 WDR35Q9P2L0 1181 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 NOL7Q9UMY1 257 aaKnown RBP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 L1RE1Q9UN81 338 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.11□□□□□ -1.59
ATXN3-229ENST00000554672 AGAP1Q9UPQ3 857 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 PCDHGA1Q9Y5H4 931 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 FHOD1Q9Y613 1164 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 AKAP13Q12802 2813 aa5.11□□□□□ -1.59
ATXN3-229ENST00000554672 A0A1B0GVT2 93 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 PP2D1A8MPX8 630 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 LAD1O00515 517 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 SCAMP3O14828 347 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 CBFA2T2O43439 604 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 TLX3O43711 291 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 PCDHGA12O60330 932 aa5.1□□□□□ -1.59
ATXN3-229ENST00000554672 BUB1BO60566 1050 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 OAS1P00973 400 aaKnown RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 MBL2P11226 248 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-229ENST00000554672 IFNGR1P15260 489 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms