RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 IL23RQ5VWK5 629 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 SUSD4Q5VX71 490 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 IQSEC1Q6DN90 963 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 SWSAP1Q6NVH7 229 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 HIBCHQ6NVY1 386 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 SARM1Q6SZW1 724 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ZNF365Q70YC5 407 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 DOK3Q7L591 496 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 TAS1R1Q7RTX1 841 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 VPS36Q86VN1 386 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CMTR2Q8IYT2 770 aaKnown RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CDYL2Q8N8U2 506 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 OR8H1Q8NGG4 311 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 GRAPLQ8TC17 118 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CHTF18Q8WVB6 975 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ATL1Q8WXF7 558 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 PEX13Q92968 403 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 TSR2Q969E8 191 aaKnown RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 RBM18Q96H35 190 aaKnown RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 VPS50Q96JG6 964 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CCDC42Q96M95 316 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CATSPER2Q96P56 530 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 NDNQ99608 321 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 CDX2Q99626 313 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 RHOXF2Q9BQY4 288 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 HGH1Q9BTY7 390 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 APOL5Q9BWW9 433 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 AP1M1Q9BXS5 423 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 GBA3Q9H227 469 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 KCTD10Q9H3F6 313 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 STARD7Q9NQZ5 370 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ZBTB40Q9NUA8 1239 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ABCF3Q9NUQ8 709 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ANO10Q9NW15 660 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 THG1LQ9NWX6 298 aaKnown RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 SYBUQ9NX95 663 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 MSRAQ9UJ68 235 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ANGPTL3Q9Y5C1 460 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 SNX8Q9Y5X2 465 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 MAP3K15Q6ZN16 1313 aa4.62□□□□□ -1.67
ATXN3-227ENST00000554491 COL3A1P02461 1466 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-227ENST00000554491 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-227ENST00000554491 A0A1B0GVG6 124 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 A0A1W2PR48 441 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 RSPH10B2B2RC85 870 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 ERVV-1B6SEH8 477 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 RNASET2O00584 256 aaKnown RBP4.61□□□□□ -1.67
ATXN3-227ENST00000554491 ENPP3O14638 875 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 ZW10O43264 779 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 KCNQ3O43525 872 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 SHOX2O60902 331 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-227ENST00000554491 GUCY1B2O75343 617 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 TSPAN9O75954 239 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 FLOT1O75955 427 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 URI1O94763 535 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-227ENST00000554491 ASMTLO95671 621 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 ECDO95905 644 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-227ENST00000554491 F2P00734 622 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 SERPINC1P01008 464 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 GSTA2P09210 222 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 RSPH10BP0C881 870 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 FOSL2P15408 326 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 CTRB1P17538 263 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 EIF2S2P20042 333 aaKnown RBP4.61□□□□□ -1.67
ATXN3-227ENST00000554491 M6PRP20645 277 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 MUTP22033 750 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 EVI2BP34910 448 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 LIFRP42702 1097 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 CBX5P45973 191 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 LIMK1P53667 647 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 USP14P54578 494 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 ALDH18A1P54886 795 aaKnown RBP4.61□□□□□ -1.67
ATXN3-227ENST00000554491 PLTPP55058 493 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 MXRA7P84157 204 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 PLIN5Q00G26 463 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 DSG1Q02413 1049 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 NHLH2Q02577 135 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 TAP1Q03518 808 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 MGAT5Q09328 741 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 AP1B1Q10567 949 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 FAPQ12884 760 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 RIPK1Q13546 671 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 PDE1CQ14123 709 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-227ENST00000554491 GNA13Q14344 377 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 MOGQ16653 247 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 BEAN1Q3B7T3 259 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 CMPK2Q5EBM0 449 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 BMP2KLQ5H9B9 411 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 RNASEH2BQ5TBB1 312 aaKnown RBP4.61□□□□□ -1.67
ATXN3-227ENST00000554491 SNX30Q5VWJ9 437 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 ANKS6Q68DC2 871 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 CTRB2Q6GPI1 263 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 SIGIRRQ6IA17 410 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 PPP4R3AQ6IN85 833 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 FAM173BQ6P4H8 233 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 CFAP161Q6P656 301 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 CRTC1Q6UUV9 634 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 ESPNLQ6ZVH7 1005 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 SLC51BQ86UW2 128 aa4.61□□□□□ -1.67
ATXN3-227ENST00000554491 APOBEC3FQ8IUX4 373 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms