RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TMEM35BQ8NCS4 154 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 SERAC1Q96JX3 654 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 ELF4Q99607 663 aaPredicted RBP19.3■□□□□ 0.68
CPSF2-203ENST00000554290 TUBGCP2Q9BSJ2 902 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 SIK2Q9H0K1 926 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 KDM4CQ9H3R0 1056 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 CCDC86Q9H6F5 360 aaKnown RBP19.3■□□□□ 0.68
CPSF2-203ENST00000554290 WDCPQ9H6R7 721 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 EBF2Q9HAK2 575 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 TMEM51Q9NW97 253 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 TOR4AQ9NXH8 423 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 VPS28Q9UK41 221 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 AJAP1Q9UKB5 411 aaPredicted RBP19.3■□□□□ 0.68
CPSF2-203ENST00000554290 RALYQ9UKM9 306 aaKnown RBP19.3■□□□□ 0.68
CPSF2-203ENST00000554290 PAXBP1Q9Y5B6 917 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 HS3ST4Q9Y661 456 aa19.3■□□□□ 0.68
CPSF2-203ENST00000554290 CFAP47Q6ZTR5 3102 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 SLC7A4O43246 635 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 ATP9BO43861 1147 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 DKK1O94907 266 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 F9P00740 461 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 CAPNS1P04632 268 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 VAV1P15498 845 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 ZNF18P17022 549 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 ERCC5P28715 1186 aaPredicted RBP19.29■□□□□ 0.68
CPSF2-203ENST00000554290 DRD3P35462 400 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 CDH4P55283 916 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 RNASE9P60153 205 aaKnown RBP19.29■□□□□ 0.68
CPSF2-203ENST00000554290 IL9RQ01113 521 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 BRMS1LQ5PSV4 323 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 ALG14Q96F25 216 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 PLCB1Q9NQ66 1216 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 GDF3Q9NR23 364 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.29■□□□□ 0.68
CPSF2-203ENST00000554290 CHMP5Q9NZZ3 219 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 FTSJ1Q9UET6 329 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 DACH1Q9UI36 760 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 STAP1Q9ULZ2 295 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 TBC1D30Q9Y2I9 924 aa19.29■□□□□ 0.68
CPSF2-203ENST00000554290 C10orf142B7Z368 130 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 C1QTNF3-AMACRE9PGA6 284 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 ALOX15BO15296 676 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 YKT6O15498 198 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 WNT1P04628 370 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 PNMA6AP0CW24 399 aaPredicted RBP19.28■□□□□ 0.68
CPSF2-203ENST00000554290 NUDT1P36639 197 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 ARRB1P49407 418 aaPredicted RBP19.28■□□□□ 0.68
CPSF2-203ENST00000554290 CXCR3P49682 368 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 KRT83P78385 493 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 RAPGEF1Q13905 1077 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 DLG2Q15700 870 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 C5orf22Q49AR2 442 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 ACBD5Q5T8D3 534 aaPredicted RBP19.28■□□□□ 0.68
CPSF2-203ENST00000554290 PRPF39Q86UA1 669 aaKnown RBP19.28■□□□□ 0.68
CPSF2-203ENST00000554290 NPY6RQ99463 290 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 TKTL2Q9H0I9 626 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 MUC3BQ9H195 1237 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 CLSTN2Q9H4D0 955 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 PIGVQ9NUD9 493 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 FARP1Q9Y4F1 1045 aaPredicted RBP19.28■□□□□ 0.68
CPSF2-203ENST00000554290 OR51B4Q9Y5P0 310 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 ZZEF1O43149 2961 aa19.28■□□□□ 0.68
CPSF2-203ENST00000554290 A0A1W2PR77 199 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 TAF4O00268 1085 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 PES1O00541 588 aaKnown RBP19.27■□□□□ 0.68
CPSF2-203ENST00000554290 MCF2LO15068 1137 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 LATO43561 262 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 ITGAVP06756 1048 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 SCNN1AP37088 669 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 IRAK1P51617 712 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 DEUP1Q05D60 604 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 DRAP1Q14919 205 aaPredicted RBP19.27■□□□□ 0.68
CPSF2-203ENST00000554290 PRAMEF14Q5SWL7 426 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 LRRC31Q6UY01 552 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 C14orf80Q86SX3 495 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 ERICH1Q86X53 443 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 SH2D3CQ8N5H7 860 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 OR52K2Q8NGK3 314 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 FAM131CQ96AQ9 280 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 C18orf8Q96DM3 657 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 CCDC114Q96M63 670 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 C2orf49Q9BVC5 232 aaPredicted RBP19.27■□□□□ 0.68
CPSF2-203ENST00000554290 ARHGEF38Q9NXL2 777 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 PPM1HQ9ULR3 514 aa19.27■□□□□ 0.68
CPSF2-203ENST00000554290 TLR4O00206 839 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 WNT9AO14904 365 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 PLRG1O43660 514 aaKnown RBP19.26■□□□□ 0.67
CPSF2-203ENST00000554290 RTN2O75298 545 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 ADCY5O95622 1261 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 CYP11B1P15538 503 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 CDH5P33151 784 aaPredicted RBP19.26■□□□□ 0.67
CPSF2-203ENST00000554290 GGCXP38435 758 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 SULT1E1P49888 294 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 PPP2CBP62714 309 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 PPP2CAP67775 309 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 DPCR1Q3MIW9 517 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 CCDC157Q569K6 752 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 HSP90AA4PQ58FG1 418 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 MIIPQ5JXC2 388 aa19.26■□□□□ 0.67
CPSF2-203ENST00000554290 KLHDC7AQ5VTJ3 777 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms