RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 ELAC2Q9BQ52 826 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 EIF2AK1Q9BQI3 630 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 JAM3Q9BX67 310 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 CELF4Q9BZC1 486 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 THAP2Q9H0W7 228 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 IRF2BPLQ9H1B7 796 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 BHMT2Q9H2M3 363 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ADAM7Q9H2U9 754 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 VCXQ9H320 206 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 ECT2Q9H8V3 914 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 SAR1AQ9NR31 198 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 SPATS2LQ9NUQ6 558 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 MAP3K20Q9NYL2 800 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 DBR1Q9UK59 544 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 SNX24Q9Y343 169 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 MRPS23Q9Y3D9 190 aaKnown RBP6.16□□□□□ -1.42
VPS33B-203ENST00000554264 USH1CQ9Y6N9 552 aa6.16□□□□□ -1.42
VPS33B-203ENST00000554264 SIP14410 1827 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 COL4A6Q14031 1691 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 TLDC2A0PJX2 215 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 TMEM120BA0PK00 339 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 ARHGEF35A5YM69 484 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 FAM47DPA6NHR8 397 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 RSPH10B2B2RC85 870 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 MSH4O15457 936 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 MBTPS2O43462 519 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 LYPLA2O95372 231 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 ANP32DO95626 131 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 F2P00734 622 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 GSTA2P09210 222 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 RSPH10BP0C881 870 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 BRAFP15056 766 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 ABCB4P21439 1286 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 COMTP21964 271 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 GCKP35557 465 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SLC16A2P36021 539 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 FLT3P36888 993 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 RAP1GAPP47736 663 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 MXI1P50539 228 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 VAMP7P51809 220 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 CASP5P51878 434 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 CDR2Q01850 454 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 ARHGAP1Q07960 439 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 MYO1EQ12965 1108 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SMAD4Q13485 552 aaKnown RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SQSTM1Q13501 440 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 BLMHQ13867 455 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SPARCL1Q14515 664 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 STXBP2Q15833 593 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 CCNG2Q16589 344 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 LY6KQ17RY6 165 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SGSM1Q2NKQ1 1148 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 TRIM71Q2Q1W2 868 aaKnown RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 C2orf27AQ580R0 203 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 ODR4Q5SWX8 454 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 LRCH2Q5VUJ6 765 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 NUGGCQ68CJ6 796 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 CAPRIN2Q6IMN6 1127 aaKnown RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 DRICH1Q6PGQ1 229 aaPredicted RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 RHBDF2Q6PJF5 856 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 PCGF5Q86SE9 256 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 EXOC3L1Q86VI1 746 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 DHX37Q8IY37 1157 aaKnown RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 TMEFF1Q8IYR6 380 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 FAM71AQ8IYT1 594 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 ENDOVQ8N8Q3 282 aaKnown RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 XXYLT1Q8NBI6 393 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 PRSS33Q8NF86 280 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 DBF4BQ8NFT6 615 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 OLIG1Q8TAK6 271 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 ZNF564Q8TBZ8 553 aaPredicted RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 NSUN6Q8TEA1 469 aaKnown RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 THAP3Q8WTV1 239 aaPredicted RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SEPT8Q92599 483 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 ALG3Q92685 438 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 GJA10Q969M2 543 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 TOP1MTQ969P6 601 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 LENG9Q96B70 501 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 C18orf8Q96DM3 657 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SAAL1Q96ER3 474 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 TSPAN17Q96FV3 270 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 VCPIP1Q96JH7 1222 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 PPP1R16BQ96T49 567 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SH3GL3Q99963 347 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 C11orf84Q9BUA3 381 aaPredicted RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 STRA6Q9BX79 667 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 FGFBP2Q9BYJ0 223 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 TRIM31Q9BZY9 425 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 GPR88Q9GZN0 384 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 LMAN2LQ9H0V9 348 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 CPVLQ9H3G5 476 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 CDC42EP4Q9H3Q1 356 aaKnown RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SEMA4AQ9H3S1 761 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 C17orf75Q9HAS0 396 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 MRPL47Q9HD33 250 aaKnown RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SEPT11Q9NVA2 429 aaKnown RBP6.15□□□□□ -1.42
VPS33B-203ENST00000554264 SLC24A2Q9UI40 661 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 MUTYHQ9UIF7 546 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 LNPEPQ9UIQ6 1025 aa6.15□□□□□ -1.42
VPS33B-203ENST00000554264 BRWD1Q9NSI6 2320 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms