RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PPM1AP35813 382 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 PCP4P48539 62 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 RCAN1P53805 252 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 KEAP1Q14145 624 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 BTBD16Q32M84 506 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 DNTTIP2Q5QJE6 756 aaKnown RBP4.38□□□□□ -1.71
SCFD1-210ENST00000553693 TRILQ7L0X0 811 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 DCP1BQ8IZD4 617 aaKnown RBP4.38□□□□□ -1.71
SCFD1-210ENST00000553693 CADM3Q8N126 398 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 BICD2Q8TD16 824 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 CLEC4CQ8WTT0 213 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 NPAS1Q99742 590 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 WDR77Q9BQA1 342 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-210ENST00000553693 ZNF304Q9HCX3 659 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 NLRC4Q9NPP4 1024 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 ARL15Q9NXU5 204 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 MAGED2Q9UNF1 606 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-210ENST00000553693 PKP3Q9Y446 797 aa4.38□□□□□ -1.71
SCFD1-210ENST00000553693 TRIP12Q14669 1992 aaPredicted RBP4.38□□□□□ -1.71
SCFD1-210ENST00000553693 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-210ENST00000553693 FAM90A18PA6NE21 464 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 FAM90A16PA6NEW6 464 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 FAM90A9PA6NNJ1 464 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 FAM90A5PA8MXJ8 464 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 FFAR2O15552 330 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 ACAA1P09110 424 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-210ENST00000553693 FAM90A15PP0C7V4 464 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 FAM90A14PP0C7W9 464 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 HOXB9P17482 250 aaPredicted RBP4.37□□□□□ -1.71
SCFD1-210ENST00000553693 CYP2J2P51589 502 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 POLE2P56282 527 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 ZP1P60852 638 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 RHAGQ02094 409 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 CRYZQ08257 329 aaKnown RBP4.37□□□□□ -1.71
SCFD1-210ENST00000553693 SPARCL1Q14515 664 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 VWA5B1Q5TIE3 1220 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 DCAF12L2Q5VW00 463 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 NFRKBQ6P4R8 1299 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 SLC30A9Q6PML9 568 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 RAB11FIP2Q7L804 512 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 TMEM200AQ86VY9 491 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 FAM217AQ8IXS0 508 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 PRR26Q8N8Z3 221 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 NUDCD2Q8WVJ2 157 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 URB1-AS1Q96HZ7 61 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 ELAC2Q9BQ52 826 aaKnown RBP4.37□□□□□ -1.71
SCFD1-210ENST00000553693 RTKNQ9BST9 563 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 B3GNT4Q9C0J1 378 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 FNIP2Q9P278 1114 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 SLC25A13Q9UJS0 675 aa4.37□□□□□ -1.71
SCFD1-210ENST00000553693 NACADO15069 1562 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 TRBV5-7A0A0A0MS05 114 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 TMEM247A6NEH6 219 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 RGS14O43566 566 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 ITGA2BP08514 1039 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 CHRNB2P17787 502 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 TNFSF8P32971 234 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 TBX4P57082 545 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 SELENOVP59797 346 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 DSC1Q08554 894 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 PTK2BQ14289 1009 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 NFATC4Q14934 902 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 PLK5Q496M5 336 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 FAM171A1Q5VUB5 890 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 NADSYN1Q6IA69 706 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 DLK2Q6UY11 383 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 KDM1BQ8NB78 822 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 SLC2A12Q8TD20 617 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 STYXQ8WUJ0 223 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 EID2BQ96D98 161 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 CDC23Q9UJX2 597 aa4.36□□□□□ -1.71
SCFD1-210ENST00000553693 CKAP5Q14008 2032 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 AGAP5A6NIR3 686 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 BECN2A8MW95 431 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 MS4A18H0YCH9 400 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 VWA5AO00534 786 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 HLA-DQA2P01906 255 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 LCATP04180 440 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 PKMP14618 531 aaKnown RBP4.35□□□□□ -1.71
SCFD1-210ENST00000553693 KLRC2P26717 231 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 PCYT1AP49585 367 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 Q0VFX4 171 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 GPS2Q13227 327 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 SHBQ15464 509 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 C5orf22Q49AR2 442 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 INO80DQ53TQ3 878 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-210ENST00000553693 FNBP1LQ5T0N5 605 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 PGBD2Q6P3X8 592 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 LRRC57Q8N9N7 239 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 ZNF527Q8NB42 609 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 ENGASEQ8NFI3 743 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 CMASQ8NFW8 434 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-210ENST00000553693 FAM110DQ8TAY7 271 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-210ENST00000553693 CPT1BQ92523 772 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 ZNF333Q96JL9 665 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 KATNAL1Q9BW62 490 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 FRMD8Q9BZ67 464 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-210ENST00000553693 TM6SF1Q9BZW5 370 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 BRD8Q9H0E9 1235 aa4.35□□□□□ -1.71
SCFD1-210ENST00000553693 PDE11AQ9HCR9 933 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms